From shane_gero at hotmail.com Wed Aug 1 07:09:21 2018 From: shane_gero at hotmail.com (Shane) Date: Wed, 1 Aug 2018 14:09:21 +0000 Subject: [MARMAM] Variation in sperm whale IPI [NEW PUBLICATION] Message-ID: Dear All, We are pleased to announce the publication of a new paper in Journal of the Acoustical Society of America: Variability of the inter-pulse interval in sperm whale clicks with implications for size estimation and individual identification By: Anne B?ttcher, Shane Gero, Kristian Beedholm, Hal Whitehead & Peter T. Madsen The paper is available here: https://asa.scitation.org/doi/10.1121/1.5047657 or PDFs by request from the authors. Abstract Sperm whales generate multi-pulsed clicks for echolocation and communication with an inter-pulse interval (IPI) determined by the size of their hypertrophied sound producing nose. The IPI has therefore been used to estimate body size and distinguish between individuals, and it has been hypothesized that conspecifics may use IPIs to recognize each other. However, the degree to which IPIs vary within individuals has not explicitly been tested, and therefore the inherent precision of this measure and its applicability for size estimation for researchers and sperm whales alike remain unknown. Here, the variability in IPI from both animal-borne Dtags and far-field recordings from echolocating and communicating sperm whales is quantified. Three different automatic methods (envelope, cepstrum, and cross-correlation) are tested and it is found that the envelope approach results in the least dispersion. Furthermore, it is shown that neither growth, depth, nor recording aspect fully explains the observed variability among clicks recorded from the same individual. It is proposed that dynamics in the soft structures of the nose are affecting IPIs, resulting in a variation of approximately 0.2?ms. Therefore, it is recommended that this variation be considered in IPI studies and that IPIs may have limited functionality as an identity cue among large groups of conspecifics. My very best, Shane **************************** Shane Gero Assistant Professor Founder | Principal Investigator Marine Bioacoustics Lab The Dominica Sperm Whale Project Institute for Bioscience Find us on Facebook Aarhus University Follow @DomWhale Denmark -------------- next part -------------- An HTML attachment was scrubbed... URL: From emchuron at ucsc.edu Wed Aug 1 11:48:59 2018 From: emchuron at ucsc.edu (Elizabeth McHuron) Date: Wed, 1 Aug 2018 11:48:59 -0700 Subject: [MARMAM] New publication: Population consequences of disturbance on income-breeding mammals Message-ID: Dear colleagues, My co-authors and I are pleased to announce the publication of our new paper describing the use of a state-dependent model for quantifying the population consequences of disturbance on income-breeding mammals. EA McHuron, LK Schwarz, DP Costa, and M Mangel. 2018. "A state-dependent model for assessing the population consequences of disturbance on income-breeding mammals. Ecological Modelling 385: 133-144 *Abstract:* Human activities continue to expand in marine and terrestrial environments, leading to increased interactions with wildlife that can have negative impacts on population dynamics. Approaches for quantifying how these interactions translate to population-level effects are therefore crucial for effective management practices and balancing human-wildlife tradeoffs. We developed a method using state-dependent behavioral theory implemented via Stochastic Dynamic Programming (SDP) for predicting the population consequences of disturbance on the physiology and reproductive behavior of an income-breeding mammal, using California sea lions (*Zalophus californianus*) as a motivating species. Emergent properties of the model included reproductive characteristics associated with long-lived species, such as variation in the age at first reproduction, early termination of pregnancy, and skipped breeding. In undisturbed model simulations, reproductive rates and the average wean date were consistent with empirically-derived estimates from sea lions and other marine mammals, highlighting the utility of this model for quantifying fecundity estimates of data-deficient species and addressing fundamental ecological processes. In disturbed model simulations, exposure to prolonged, repetitive disturbances negatively impacted population growth; in addition, short, infrequent disturbances had the potential for adverse effects depending on the behavioral response of sea lions and the probability of being disturbed. The adverse effect of disturbance on population dynamics was due to a combination of reduced pup recruitment (survival to age one) resulting from a lower wean mass and increased abortion rates that led to skipped reproductive years, both of which have been documented for marine mammal populations experiencing natural fluctuations in prey availability. The derivation of state- and time-dependent reproductive decisions using an SDP model is an effective approach that links behavioral and energetic effects at the individual level to changes at the population level, and one that serves a dual purpose in the ability to quantify basic biological parameters and address ecological questions irrespective of disturbance. A link to the paper with free access can be found here https://authors.elsevier.com/a/1XUOs15DJ~tXvm Please don't hesitate to contact me if you would like a pdf of the article and do not have access to the journal (emchuron at ucsc.edu). Best, Liz McHuron -- Elizabeth McHuron, Ph.D. Research Scientist University of Washington JISAO 115 McAllister Way Santa Cruz, CA 95060 emchuron at uw.edu emchuron at ucsc.edu -------------- next part -------------- An HTML attachment was scrubbed... URL: From jeppekaczmarek at gmail.com Wed Aug 1 22:25:20 2018 From: jeppekaczmarek at gmail.com (Jeppe Kaczmarek) Date: Thu, 2 Aug 2018 07:25:20 +0200 Subject: [MARMAM] New publication on the dive response in pinnipeds Message-ID: Dear MARMAM community We are pleased to announce a new research article in The Journal of Experimental Biology on the dive response in pinnipeds. *Drivers of the dive response in pinnipeds; apnea, submergence or temperature?* Jeppe Kaczmarek, Colleen Reichmuth, Birgitte I. McDonald, Jakob H. Kristensen, Josefin Larson, Fredrik Johansson, Jenna L. Sullivan, Peter T. Madsen Journal of Experimental Biology 2018 : jeb.176545 doi: 10.1242/jeb.176545 *Abstract: * Long and deep dives in marine mammals are enabled by high mass-specific oxygen stores and the dive response (DR), which reduces oxygen consumption in concert with increased peripheral vasoconstriction and a lowered heart rate during dives. Diving heart rates of pinnipeds are highly variable and modulated by many factors, such as breath holding (apnea), pressure, swimming activity, temperature, and even cognitive control. However, the individual effects of these factors on diving heart rate are poorly understood due to the difficulty of parsing their relative contributions in diving pinnipeds. Here, we examined the effects of apnea and external sensory inputs as autonomic drivers of bradycardia. Specifically, we hypothesized that 1) water stimulation of facial receptors would?as is the case for terrestrial mammals?enhance the dive response, 2) increasing the facial area stimulated would lead to a more intense bradycardia, and 3) cold water would elicit a more pronounced bradycardia than warm water. Three harbor seals (*Phoca vitulina*) and a California sea lion (*Zalophus californianus*) were trained to breath-hold in air and with their heads submerged in a basin with variable water level and temperature. We show that bradycardia occurs during apnea without immersion. We also demonstrate that bradycardia is strengthened with both increasing area of facial submersion and colder water. Thus, we conclude that initiation of the DR in pinnipeds is more strongly related to breath holding than in terrestrial mammals, but the degree of the DR is potentiated autonomically via stimulation of facial mechano- and thermoreceptors upon submergence. The paper can be found here: http://jeb.biologists.org/content/early/2018/05/16/jeb.176545 Pdf can be requested by sending me an email: jeppekaczmarek at gmail.com Best wishes Jeppe Kaczmarek -------------- next part -------------- An HTML attachment was scrubbed... URL: From eknight at pewtrusts.org Wed Aug 1 10:47:18 2018 From: eknight at pewtrusts.org (Emily Knight) Date: Wed, 1 Aug 2018 17:47:18 +0000 Subject: [MARMAM] Webinar invite: Working group to develop recommendations for estimating bycatch for the MMPA Import Provisions Message-ID: <90e4eef39a5e4fbb82d944770f571d4f@pewtrusts.org> To the MARMAM community: I want to invite you to a one-hour webinar on Wednesday, August 15 at 1:00 PM Pacific time/4:00 PM Eastern time to share information about the Marine Mammal Bycatch Working Group, a team of experts convened by the University of Washington Ocean Modeling Forum and Oceans Initiative. The working group aims to assist nations seeking to comply with the Marine Mammal Protection Act (MMPA) Import Provisions by developing scientific tools to evaluate data sets and methods for determining bycatch rates for marine mammal populations. The working group is funded by the Lenfest Ocean Program. To learn more, visit the Ocean Modeling Forum website here, and the Lenfest website here. During the webinar (agenda here), the co-chairs and colleagues will describe the working group charge, the products they plan to develop over the next two years, and answer questions. Instructions to register for and join the webinar are also provided below. We would also appreciate it if you would forward this information to any colleagues that might be interested, or recommend other contacts to me at eknight at pewtrusts.org. Experts in the field, decision-makers in other nations and international management bodies, and NGOs in particular might be interested. I'm also happy to answer any questions, so please reach out or point others to me as appropriate. Best, Emily, Manager, Lenfest Ocean Program ------------------------------ Webinar Instructions: Date: Wednesday, August 15, 2018 Time: 1:00 PM Pacific time/4:00 PM Eastern time For remote access: Please fill out the registration form before the event is scheduled to begin. Event number: 791 006 117 Event password: mmpa2018 For teleconference audio after you join the webinar, either: 1. Select "Call Using Computer" 2. Select "Call me" and provide your phone number (recommended over option #3) 3. Call the number below and enter the access code. * In the U.S. and Canada, dial 1-855-214-7745. * In Australia, dial 61-0-291866690. * For additional global call in numbers click here. i. Enter conference code 639 080 0317 ii. After dialing the conference code, be sure to enter the Attendee ID that will appear on your screen. You will not be prompted to do so. Emily Knight Manager, Lenfest Ocean Program [LenfestOceanProgram-Logo-Color-(2)] 901 E Street NW, 10th Floor Washington, DC 20004 SIGN UP FOR LENFEST OCEAN NEWS w: 202-540-6389 | c: 202-384-6534 | e: eknight at pewtrusts.org www.lenfestocean.org|twitter: @lenfestocean -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 9934 bytes Desc: image001.png URL: From kristina.cammen at maine.edu Wed Aug 1 07:57:34 2018 From: kristina.cammen at maine.edu (Kristina Cammen) Date: Wed, 1 Aug 2018 10:57:34 -0400 Subject: [MARMAM] MS Position: Marine Mammal Ecology (University of Maine) Message-ID: An MS research assistantship is available through the School of Marine Sciences in the College of Natural Sciences, Forestry and Agriculture at the University of Maine, Orono to partially support a graduate student involved in research to understand the role of pinnipeds in the Penobscot River Estuary. This research to assess predator risk to diadromous fish conservation represents a new collaboration between the University of Maine, NOAA, and the Maine Department of Natural Resources. The position will involve analysis of existing data sources to assess potential and realized seal predation events on river fish, including endangered sturgeon and salmon, as well as field work to assess the utility of photo-identification techniques in identifying individual gray and harbor seals that use the river habitat. Beyond the School of Marine Sciences, students in our lab also have the opportunity to be engaged with interdisciplinary scholarship as part a new One Health & the Environment Initiative and the Mitchell Center for Sustainability Solutions at the University of Maine. Qualifications: Bachelor?s degree in biology, ecology, marine science, environmental studies or a related field. Preferred candidates will be able to demonstrate aptitude in quantitative data analysis and scientific writing. Prior experience with marine mammal photo-ID, particularly of pinnipeds, will be beneficial. Individuals that are passionate, responsible, hardworking, willing to learn, and have attention to detail are encouraged to apply. The accepted student will be required to complete motorboat operator training. How to Apply: Interested and qualified applicants are encouraged to email a cover letter, CV, and unofficial transcripts to Kristina Cammen ( kristina.cammen at maine.edu). All applications received before August 31, 2018 will receive full consideration, and applications will be accepted on a rolling basis thereafter until the position is filled. Expected Start Date: January 2019 -- Kristina Cammen Assistant Professor of Marine Mammal Science School of Marine Sciences University of Maine Orono, ME 04469 cammenlab.org -------------- next part -------------- An HTML attachment was scrubbed... URL: From Tiphaine.JeanniardDuDot at dfo-mpo.gc.ca Thu Aug 2 13:00:36 2018 From: Tiphaine.JeanniardDuDot at dfo-mpo.gc.ca (Jeanniard Du Dot, Tiphaine) Date: Thu, 2 Aug 2018 20:00:36 +0000 Subject: [MARMAM] New publication: Trade-offs between foraging efficiency and pup feeding rate of lactating northern fur seals in a declining population Message-ID: <5871DCC62B5A5743B9002E32B90205CB10994EFC@SVONKENMBX02.ENT.dfo-mpo.ca> Dear MARMAM community, My co-authors and I are please to announce the publication of the article ' Trade-offs between foraging efficiency and pup feeding rate of lactating northern fur seals in a declining population? in Marine Ecology Progress Series and freely available online (open access) at https://www.int-res.com/abstracts/meps/v600/p207-222/ Citation: Jeanniard du Dot T, Trites AW, Arnould JPY, Speakman JR, Guinet C (2018) Trade-offs between foraging efficiency and pup feeding rate of lactating northern fur seals in a declining population. Mar Ecol Prog Ser 600:207-222. https://doi.org/10.3354/meps12638 Abstract: Foraging strategies and their resulting efficiency (energy gain to cost ratio) affect animals? survival and reproductive success and can be linked to population dynamics. However, they have rarely been studied quantitatively in free-ranging animals. We investigated foraging strategies and efficiencies of wild northern fur seals Callorhinus ursinus during their breeding season to understand potential links to the observed population decline in the Bering Sea. We equipped 20 lactating females with biologgers to determine at-sea foraging behaviours. We measured energy expenditure while foraging using the doubly-labelled water method, and energy gained using (1) the types and energy densities of prey consumed, and (2) the number of prey capture attempts (from acceleration data). Our results show that seals employed 2 foraging strategies: one group (40%) fed mostly in oceanic waters on small, high energy-density prey, while the other (60%) stayed over the shallow continental shelf feeding mostly on larger, lower quality fish. Females foraging in oceanic waters captured 3 times more prey, and had double the foraging efficiencies of females that foraged on-shelf in neritic waters. However, neritic seals made comparatively shorter trips, and likely fed their pups ~20 to 25% more frequently. The presence of these strategies which either favor foraging efficiency (energy) or frequency of nursing (time) might be maintained in the population because they have similar net fitness outcomes. However, neither strategy appears to simultaneously maximize time and energy allocated to nursing, with potential impacts on the survival of pups during their first year at sea. Best wishes, Tiphaine Jeanniard-du-Dot Tiphaine Jeanniard-du-Dot, PhD Fisheries and Oceans Canada/Marine mammal biology and conservation Institut Maurice-Lamontagne 850 Route de la Mer, P.O. Box 1000 Mont-Joli, QC, G5H 3Z4, CANADA Cell:+1-604-724-4230 / Fax: +1-418-775-0740 -------------- next part -------------- An HTML attachment was scrubbed... URL: From sea.research.conservation at gmail.com Fri Aug 3 05:40:40 2018 From: sea.research.conservation at gmail.com (Erin Church - Sea Search Research and Conservation) Date: Fri, 3 Aug 2018 14:40:40 +0200 Subject: [MARMAM] Internship Opportunity: Sea Search Research and Conservation Message-ID: The Sea Search group conducts research on marine megafauna, primarily whales and dolphins, in southern Africa. Our research covers a wide range of topics from understanding habitat use and ecological relationships in a changing climate to behavioural acoustics. Our primary focus is the production of peer-reviewed scientific research and student training. In addition, we engage in a number of education and outreach activities. The Sea Search Research and Conservation intern programme is aimed at students and graduates looking for medium to long-term placements to develop analytical skills, conduct student projects or short theses and experience active field work and data analysis in the field of cetacean research. We have placements available from September 2018 to May 2019 for periods of at least 2 months. We study a range of species and students/interns would be involved in processing and analysis of (an) appropriate datasets. Fieldwork during this period will focus on feeding groups of humpback whales and endangered humpback dolphins, but the study area has a very diverse species list and data are collected from all encountered cetaceans. Interns will form part of a highly motivated team and will be involved in many Sea Search activities during their stay, including outreach and education activities. Requirements: People with a background in biology and some prior relevant experience (photography, passive acoustics, boat skills) would be preferred, although all training will be given. Interns must have a mature attitude to their work and be prepared to work long days and occasional weekends. There is a monthly cost associated with this programme which includes accommodation, training and fieldwork. Interns who stay through December 2018 will have the opportunity to attend the African Bioacoustics Community Conference for a small additional fee https://africanbioacoustic.wixsite.com/abcommunity. If you are interested in these placements, please contact info at seasearch.co.za for further information or look at our websites and social media sites: www.seasearch.co.za https://www.facebook.com/seasearch/ https://www.facebook.com/NamibianDolphinProject/ https://www.facebook.com/africanbioacousticscommunity/ Many Thanks! Erin Church Sea Search Research and Conservation 4 Bath Road Muizenberg 021 788 1206 -------------- next part -------------- An HTML attachment was scrubbed... URL: From leelarajamani at gmail.com Thu Aug 2 21:25:44 2018 From: leelarajamani at gmail.com (Leela Rajamani) Date: Fri, 3 Aug 2018 12:25:44 +0800 Subject: [MARMAM] =?utf-8?q?Vacancy_=E2=80=93Masters/PhD_Student_for_Dolph?= =?utf-8?q?in_Ecology_and_Conservation_Study_in_Penang=2C_Malaysia?= Message-ID: Dear MARMAM, Please share Vacancy ?Masters/PhD Student for a Dolphin Ecology and Conservation Study in Penang, Malaysia -Knowledge on cetacean ecology/inshore dolphin ecology -Ability to conduct photo-identification, mark-recapture analysis a plus -Independent -Accustomed to long field hours -Team player -Able to get registered as a student as soon as possible -Research is fully funded If interested please send a curriculum vitae and letter of interest by August 15th, 2018 to Dr. Leela Rajamani : leelarajamani at usm.my , Centre for Marine and Coastal Studies, Universiti Sains Malaysia,11800 USM, Penang, Malaysia Please also send a page long essay of ?Why do I want to be marine mammal scientist/conservationist? Regards, Leela -- Leela Rajamani (Ph.D.) Marine Mammal Conservation Senior Lecturer, Centre for Marine and Coastal Studies, Universiti Sains Malaysia, 11800 Pulau Pinang, Malaysia. Tel no: 60-4-8852750 (CEMACS) 60-4 6535922 (Main Campus) Fax No: 60-4-8852751 Email leelarajamani at gmail.com leelarajamani at usm.my -------------- next part -------------- An HTML attachment was scrubbed... URL: From renae.sattler at yahoo.com Fri Aug 3 12:53:05 2018 From: renae.sattler at yahoo.com (renae.sattler at yahoo.com) Date: Fri, 3 Aug 2018 19:53:05 +0000 (UTC) Subject: [MARMAM] New Publication: Characterizing estrus by trans-abdominal ultrasounds, fecal estrone-3-glucuronide, and vaginal cytology in the Steller sea lion ( Eumetopias jubatus ) References: <1939465093.1793267.1533325985326.ref@mail.yahoo.com> Message-ID: <1939465093.1793267.1533325985326@mail.yahoo.com> Dear MARMAM Readers, My co-authors and I are happy to share our recent publication: "Characterizing estrus by trans-abdominal ultrasounds, fecal estrone-3-glucuronide, and vaginal cytology in the Steller sea lion (Eumetopias jubatus)".? Sattler R, Bishop A, Woodie K, Polasek L. Characterizing estrus by trans-abdominal ultrasounds, fecal estrone-3-glucuronide, and vaginal cytology in the Steller sea lion (Eumetopias jubatus). Theriogenology 120:25-32.?https://doi.org/10.1016/j.theriogenology.2018.07.020 Abstract:Theability to monitor the estrus cycle in wild and captive marine species isimportant for identifying reproductive failures, ensuring a successful breedingprogram, and monitoring animal welfare. Minimally invasive sampling methods tomonitor estrus in captive populations have been developed, but results suggestthese tools can be species-specific in their precision and accuracy. Therefore,the minimally invasive sampling methods of trans-abdominal ultrasounds, a fecalsteroid analysis (estrone-3-glucuronide, E1G), and vaginal cytology, wereevaluated for their efficacy to characterize and monitor estrus in a captivebreeding population of Steller sea lions (Eumetopiasjubatus). Three adult females were sampled over five breeding seasons,resulting in six estrus profiles characterized by trans-abdominal ultrasounds, fiveby fecal E1G, and four by vaginal cytology. Animals were trained to allowtrans-abdominal ultrasounds, fecal samples, and vaginal swabs to be collected approximatelydaily. Of the 76 trans-abdominal ultrasound sessions attempted, 8 successfullyvisualized both ovaries. From these scans, the chronology of ovarian changesduring proestrus and estrus was estimated. The time from the detection of developingfollicles to the identification of a dominate follicle occurred in 2-5 days anda corpus hemorrhagicum formed approximately 4 days later. However, becausevisualization of the ovaries was prevented by the gastrointestinal system in 88%of scans, this tool was overall unreliable for monitoring changes associatedwith estrus. To detect fine scale physiological changes associated with estrus,we analyzed changes in fecal E1G (n = 62) and vaginal cytology (n = 157) 15days before and after each female?s single copulation event (Day = 0). Changesin fecal E1G had the highest accuracy at detecting Day = 0. Fecal E1G increasedleading up to estrus, peaked at Day = 0, and then declined. Although we didobserve the characteristic increase in superficial cells associated withimpending estrus, the type of cell which peaked closest to Day = 0 wasintermediate. The uncertainty around the peak in intermediate cells, indicatingestrus, was greater than the uncertainty associated with detecting estrus fromfecal E1G. Collectively, these results suggest that changes in fecal E1G andvaginal cytology are viable tools to detect estrus in Steller sea lions, butrequire daily sampling to detect gradual changes, limiting their applicabilityto studies of wild populations. Please email me for a copy of the pdf.?renaes at alaskasealife.org Thanks!? Renae SattlerResearch Associate Alaska SeaLife CenterSeward, AK 99664907-224-6882 -------------- next part -------------- An HTML attachment was scrubbed... URL: From sandro.mazzariol at unipd.it Fri Aug 3 12:19:22 2018 From: sandro.mazzariol at unipd.it (Sandro Mazzariol) Date: Fri, 3 Aug 2018 21:19:22 +0200 Subject: [MARMAM] New publication on sperm whales mass stranding Message-ID: <12367a9a-6df6-eef5-1cac-a18a6444499f@unipd.it> Dear Collegues my co-author and I are happy to announce a new publication reporting investigations on a sperm whales' mass stranding occurred in Italy in 2014. In that event, a pod of 7 specimens stranded alive along the Italian coast of the Central Adriatic Sea: 3 individuals died on the beach after a few hours due to internal damages induced by prolonged recumbency; the remaining 4 whales were refloated after great efforts. All the dead animals were genetically related females; one was pregnant. All the animals were infected by dolphin morbillivirus (DMV) and the pregnant whale was also affected by a severe nephropathy due to a large kidney stone. Other analyses ruled out other possible relevant factors related to weather conditions or human activities. The results of multidisciplinary post-mortem analyses revealed that the 7 sperm whales entered the Adriatic Sea encountering adverse weather conditions and then kept heading northward following the pregnant but sick leader of the pod, thereby reaching the stranding site. DMV infection most likely played a crucial role in impairing the health condition and orientation abilities of the whales. They did not steer back towards deeper waters, but eventually stranded along the Central Adriatic Sea coastline, a real trap for sperm whales. The full paper could be downloaded at: https://www.nature.com/articles/s41598-018-29966-7 *Citation:* Mazzariol S, Centelleghe C, Cozzi B, Povinelli M, Marcer F, Ferri N, Di Francesco G, Badagliacca P, Profeta F, Olivieri V, Guccione S, Cocumelli C,Terracciano G, Troiano P, Beverelli M, Garibaldi F, Podest? M, Marsili L, Fossi MC, Mattiucci S, Cipriani P, De Nurra D, Zaccaroni A, Rubini S, Berto D, deQuiros YB, Fernandez A, Morell M, Giorda F, Pautasso A, Modesto P, Casalone C, Di Guardo G. Multidisciplinary studies on a sick-leader syndrome-associated massstranding of sperm whales (Physeter macrocephalus) along the Adriatic coast of Italy. Sci Rep. 2018 Aug 1;8(1):11577. All the best Sandro -- Dr. Sandro Mazzariol, DVM, PhD Dipartimento di Biomedicina Comparata e Alimentazione (BCA) Universit? degli Studi di Padova Cetaceans strandings Emergency Response Team (CERT) AGRIPOLIS - Ed. Museo Viale dell'Universit? 16 35020 - Legnaro (PD) tel.: +39 049 827 2963 fax: +39 049 827 2973 skype: smazzariol -------------- next part -------------- An HTML attachment was scrubbed... URL: From sandro.mazzariol at unipd.it Fri Aug 3 12:22:27 2018 From: sandro.mazzariol at unipd.it (Sandro Mazzariol) Date: Fri, 3 Aug 2018 21:22:27 +0200 Subject: [MARMAM] new articles on postmortem analyses on bycaught animals applying diatoms technique In-Reply-To: <5918965f-fdad-5f10-9dae-8b7f099a20ff@unipd.it> References: <5918965f-fdad-5f10-9dae-8b7f099a20ff@unipd.it> Message-ID: <52dcd688-52ed-2c91-6505-ee54c73b043d@unipd.it> Dear Collegues I'm glad to announce a new article on a forensic techniques which could be useful in by-catch diagnosis. This article is a preliminary evaluation of the presence of diatoms in bones of stranded marine vertebrates including cetaceans. Diatoms researches are used in forensic human medicine in order to support drowning evidences. Further studies could enforce the use of this technique in bycatch postmortem diagnosis along with other findings. Details could be found in the following maniscript * * *The diatoms test in veterinary medicine: a pilot study on cetaceans and sea turtles.* Fishing activities are considered one of the most relevant threats for cetaceans and sea turtles con- servation since these animals are sometimes found dead entangled in fishing gears. Currently, postmortem diagnosis is based mainly on the presence of nets and lines on the body and the related marks and injuries evident at gross examination. A more detailed and objective evidence is needed to clarify doubts cases and the diatoms technique, used in forensic human medicine, could support drowning diagnosis also in this field. Diatoms? investigation was implemented to be applied in ma- rine vertebrate on 8 striped (Stenella coeruleoalba) and 1 bottlenose (Tursiops truncatus) dolphins and 5 sea turtles (Caretta caretta) stranded along the Italian coastlines with a likely cause of death hypothized on necropsies carried out by veterinary pathologists. Diatoms were microscopically searched in the bone marrow collected from long bones implementing protocols used in human medicine and their presence was observed in 4 cetaceans and 2 sea turtles. Despite a clear relation between diatoms? presence and amount and the likely cause of death was not proved due to the poor number of samples, the higher burden of diatoms was found in 3 animals deemed to be death for the interaction with human activity. Despite more studied are necessary to identify the possible relation between the cause of death and diatoms? findings, the present study implemented this technique to be adapted to marine animals, confirming its possible application also in veterinary forensic medicine. CITATION:? Rubini S, Frisoni P, Russotto C, Pedriali N, Mignone W, Grattarola C, Giorda F, Pautasso A, Barbieri S, Cozzi B, Mazzariol S, Gaudio RM. The diatoms test in veterinary medicine: A pilot study on cetaceans and sea turtles. Forensic Sci Int. 2018 Jul 5. pii: S0379-0738(18)30358-X Full text could be downloaded at the following address https://www.sciencedirect.com/science/article/pii/S037907381830358X?via%3Dihub All the best Sandro Mazzariol -- Dr. Sandro Mazzariol, DVM, PhD Dipartimento di Biomedicina Comparata e Alimentazione (BCA) Universit? degli Studi di Padova Cetaceans strandings Emergency Response Team (CERT) AGRIPOLIS - Ed. Museo Viale dell'Universit? 16 35020 - Legnaro (PD) tel.: +39 049 827 2963 fax: +39 049 827 2973 skype: smazzariol -------------- next part -------------- An HTML attachment was scrubbed... URL: From tmwillia at ucsc.edu Sun Aug 5 13:53:58 2018 From: tmwillia at ucsc.edu (Terrie Williams) Date: Sun, 5 Aug 2018 13:53:58 -0700 Subject: [MARMAM] Marine Mammal Biologist position at the University of California - Santa Cruz Message-ID: Dear Marine Mammal Community, We are pleased to announce the availability of a unique job opportunity at the University of California- Santa Cruz for a Marine Mammal Biologist.? The position is described below and in the attached file.? It is open across all academic levels.? The application period will be open through September 15.? We look forward to hearing from this community of marine mammal scientists. Best, Terrie M. Williams PhD Department of Ecology and Evolutionary Biology - UCSC -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: nbadcbodgligpgkl.png Type: image/png Size: 241680 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: Job Posting.FINAL.JPF00590-19.pdf Type: application/pdf Size: 83380 bytes Desc: not available URL: From posters at acsonline.org Sat Aug 4 03:11:44 2018 From: posters at acsonline.org (posters at acsonline.org) Date: Sat, 4 Aug 2018 06:11:44 -0400 (EDT) Subject: [MARMAM] American Cetacean Society abstract deadline extended Message-ID: <1533377504.25245709@webmail.memberclicks.com> Dear MARMAM subscribers, We are pleased to announce the American Cetacean Society's 16th International Conference to be held November 2-4, 2018 in Newport Beach, CA. Whales & Us: The Next Generation ACS's International Conference is a highly respected gathering of scientists, educators, conservationists, students, hobbyists and anyone with an interest in cetaceans and their ocean environment.This conference will focus on the future of whale, dolphin and porpoise conservation. Activities will include speaker sessions with world-renowned experts, a poster session including a student research poster contest, a photography contest, a silent auction, book signings, an art show, vendor exhibits, and much more. We will also hold our traditional pre-conference all-day whale watching trip on Friday November 2nd, and will venture out into the rich southern California waters between Catalina Island and Orange County. More info can be found here: https://www.acsonline.org/2018-conference CALL FOR ABSTRACTS: DEADLINE EXTENDED Abstracts for the Poster Session and Student Research Poster Contest will now be accepted through August 19th, 2018. - Poster Session: This session will showcase a variety of programs and projects based out of educational institutions, agencies, and non-profit organizations. It isintended to encourage discussion and facilitate the exchange of current information pertaining to cetacean research, conservation, policy, and education. - Student Research Poster Contest: We invite graduate and undergraduate students to present their work in the ACS Conference Student Contest. The contest is for poster presenters, with a $250 First-Place prize for the top presenter, a $150 Second-Place prize, and a $100 Third-Place prize. First, second- and third-place winners will be recognized at the conference Sunday morning and will be featured in an upcoming issue of the ACS Spyhopper newsletter. The student contest provides an opportunity for students at universities and institutions to gain presentation experience in a professional environment and provides a forum in which existing professionals and scientists may meet their rising peers. Abstract submissions will be accepted from current undergraduate or graduate students, student interns, and recently graduated students (within the past year) who conducted their work prior to graduation. Student authors must be from accredited institutions of higher education. For submission guidelines and details, please visit : http://www.acsonline.org/assets/docs/ACS_2018_Conference/poster%20session%20guidelines%202018%20ACS.final.pdf Poster session-related inquiries can be sent to posters at acsonline.org See you in November! Sincerely, The American Cetacean Society Conference Poster Committee AMERICAN CETACEAN SOCIETY P.O. Box 51691 Pacific Grove, CA 93950 -------------- next part -------------- An HTML attachment was scrubbed... URL: From cdmacleod at GISinEcology.com Mon Aug 6 02:54:11 2018 From: cdmacleod at GISinEcology.com (Colin D. MacLeod) Date: Mon, 6 Aug 2018 10:54:11 +0100 Subject: [MARMAM] Second Call: Training Course - An Introduction To Using GIS/QGIS In Biological Research, 1-2 October 2018 Message-ID: This is the second call for attendees for our upcoming introductory training course for those who wish to learn how to use GIS in biological research, and it will provide an introduction to using GIS in a wide variety of biological research situations, including marine mammal research, and the course includes two marine-mammal-specific practical exercises (one based around calculating the observed abundance per unit survey effort of dolphins using a grid-based approach, and one based around mapping species richness for North Atlantic beaked whales). It is primmarily based around a GIS software package called QGIS, which is free to use. As a result, it is one of the best options for doing GIS for self-employed MMOs, small environmental consultancies, NGOs, those working on small marine mammal research projects with limited budgets for purchasing software licences and students working at universities who do not have access to commercial GIS software packages. The course will be held in Glasgow, Scotland, on the 1st and 2nd of October 2018, and it will be taught by Dr Colin D. MacLeod, who has more than 15 years experience in using GIS for a wide variety of biological purposes. For those who cannot attend this course in person, a shorter online course based on the same materials is available from our sister site www.GISforBiologists.com. The course will primarily be based around QGIS (also known as Quantum GIS), which provides a user-friendly, open-source, free alternative to commercial GIS software packages, and it is becoming increasingly widely used in both academic and commercial organisations As a result, it is aimed at both those with no GIS experience, but wish to learn how to do GIS with QGIS, and also those who are familiar with using commercial GIS software, such as ArcGIS, but who wish to learn how to use QGIS as an alternative. However, this course is taught using software-independent approach, and it is also open to those who wish to learn how to use ArcGIS to do biological GIS. The practical exercises on this course will be based on those in the recently published GIS For Biologists: A Practical Introduction For Undergraduates by Dr MacLeod, and a free copy of this book will be provided to all participants. Attendance will be limited to a maximum of 16 people, and the course will cost ?295 per person (?200 for students, the unwaged and those working for registered charities). To book a place, or for more information, visit http://gisinecology.com/an-introduction-to-using-gis-in-biological-research/ or email info at GISinEcology.com. Glasgow has great transport links and is within half a days travel by car or by fast train links from most cities in the UK. For example, it can be reached in as little as 4h 30mins from London by train. It can also be reached by direct flights from many European cities and the flight time is generally under four hours. The course will be held in central Glasgow at the IET Glasgow Teacher Building (14 St Enoch Square, Glasgow, G1 4DB, UK). Attendees will be responsible for their own accommodation. However, Glasgow provides a wide range of accommodation options to fit most budgets. ================================================================================== GIS IN ECOLOGY - Providing Training, Advice And Consultancy On The Use Of GIS In Ecology Web: www.GISinEcology.com Email: info at GISinEcology.com Need to ask a question about using GIS? Try the GIS In Ecology Forum: www.GISinEcology.com/GIS_in_Ecology_forum.htm Books From GIS In Ecology Staff: GIS For Biologists: A Practical Introduction For Undergraduates; RRP: ?24.99 An Introduction To Using GIS In Marine Biology; RRP: ?44.99 An Introduction To Using GIS In Marine Biology: Supplementary Workbook One - Creating Maps Of Species Distribution; RRP: ?19:99 If you wish to purchase these books, visit: http://www.gisinecology.com/Book_Shop.htm To help the environment, please do not print out this email unless it is unavoidable. ================================================================================== --- This email has been checked for viruses by Avast antivirus software. https://www.avast.com/antivirus -------------- next part -------------- An HTML attachment was scrubbed... URL: From castelblanco.nataly at gmail.com Tue Aug 7 09:38:18 2018 From: castelblanco.nataly at gmail.com (Nataly Castelblanco) Date: Tue, 7 Aug 2018 11:38:18 -0500 Subject: [MARMAM] Third Latin American Symposium for Manatee Research and Conservation (SILAMA), Lima, Peru, Nov 4th 2018 Message-ID: Dear Friends, We are pleased to invite you to attend the upcoming "Third Latin American Symposium for Manatee Research and Conservation (SILAMA)" to be held in Lima, Per? on November 4th 2018, in the frame of the Conference of the Latin American Society of Aquatic Mammal Experts (SOLAMAC). This symposium since its inception has been conceived as a space to share advances in research and conservation of manatee species (Trichechus manatus and T. inunguis) in Latin America. We also aim: 1. To review the progresses and gaps in research and conservation of manatee populations in Latin America. 2. To exchange experiences and advances in the management and conservation of these species both in wildlife and in captivity 3. To discuss methodological approaches that allow meeting current needs, and that fit to local ecological and economic conditions. 4. To make recommendations to promote international cooperation for research and conservation of sirenians in Latin America We encourage all researchers, students and stakeholders working with manatees in Latin America to submit abstracts. We welcome all submissions regarding distribution, genetics, physiology, veterinary medicine, threats, conservation (in situ and ex situ), management, environmental education, cultural aspects and others. ++ To elaborate the abstract, please follow the instructions provided in the SOLAMAC website. Abstracts should be sent to silama3.2018 at gmail.com before August, 31th 2018. ++ Answers of acceptation will be given on September 20th 2018 ++ Fee for the workshop: US$10. Registration through the SOLAMAC website http://solamac2018.com/ . (workshops section). Questions? please contact us at silama3.2018 at gmail.com See you in Lima! Att. The organizers ****************************************************************************************** *Nataly Castelblanco-Mart?nez, PhD**CONACYT Research Fellow ? University of Quintana Roo * ResearchGate profile ******************************************************************************************** -------------- next part -------------- An HTML attachment was scrubbed... URL: From interns at aimm-portugal.org Mon Aug 6 15:26:42 2018 From: interns at aimm-portugal.org (AIMM Internships) Date: Mon, 6 Aug 2018 23:26:42 +0100 Subject: [MARMAM] DOLPHIN RESEARCH INTERNSHIP IN PORTUGAL Message-ID: *BACKGROUND: *The Marine Environment Research Association - AIMM, is a non-profit, non-governmental organization focused on the research and conservation of marine species, running an ongoing study of cetaceans in southern Portugal (Algarve). This project aims to obtain baseline information on species occurrence, behavior, and social structure of the local cetacean populations in order to obtain scientific data to support conservation measures and inform marine management policies. The main species observed are Short-beaked common dolphins (Delphinus delphis), Bottlenose dolphins (Tursiops truncatus), and Harbour porpoises (Phocoena phocoena), although other species such as Minke whales (Balaenoptera acutorostrata) and Fin whales (Balaenoptera physalus) can also be sighted. AIMM Interns are young, hard-working individuals who are willing to contribute to the association and support on-going activities, while experiencing fieldwork at sea, learning data collection and processing methodologies, and being a part of AIMM's team of researchers and marine biologists for a period of time. All team members and participants share accommodation, house tasks, knowledge and experience in an environmental friendly and multicultural environment. Interns have the additional option to enrich their time with AIMM by beginning or improving their SCUBA skills with a PADI-certified instructor. *WHERE:* Albufeira, Algarve, Portugal *WHEN:* The field season lasts from May 1 - October 31, 2018. The minimum internship attendance is 7 days, preferably starting on a Monday. *FIELDWORK: *The field trips are conducted in AIMM's research vessel, Ketos, or in opportunistic platforms (commercial dolphin-watching boats). Fieldwork is dependent on weather conditions and seat availability in the dolphin-watching boats. Field days can be intense, especially in the peak of summer, but are fulfilling and good fun. The interns will be trained to: ? Conduct on-board surveys of marine species occurrence; ? Record effort tracks on a handheld GPS; ? Collect data on behavior, group size, species, etc.; ? Collection of photo to photo-identification, acoustic recording, and underwater videos while on-board. *DATA ANALYSIS: *This will be conducted on a daily basis and will entail entering data into established databases and spreadsheets, photo-identification processing, and preliminary data interpretation. *INTERNSHIP FEES:* AIMM is a non-profit organization that relies on donations from our volunteers, partners, and conservation-minded people like you so that we may continue our important research and education programs in the Algarve. This internship requires a monetary contribution which is used to off-set the cost of accommodation and running a non-profit. For more information on internship fees for the 2018 season, please contact: interns at aimm-portugal.org *Included* in the fee is: ? Accommodation in the research house; ? Transportation to/from the marina; ? Meals (breakfast, lunch, and dinner); ? Fieldwork in the research vessel or commercial dolphin-watching vessels. *Not included* in the fee is: ? Transportation to/from Albufeira; ? Meals in restaurants and snacks; ? Free time activities; ? Personal insurance (all participants should have health and/or travel insurance); ? Personal expenses. *INTERNS ARE EXPECTED TO:* ? Be above the age of 16; ? Have a mature attitude towards marine mammal research and environment; ? Be autonomous and flexible; ? Be able to live and work in an international team and mainly outdoors at sea; ? Speak English; ? Participate for minimum 7 days. *Preference will be given* to those who have: ? Relevant marine mammal field experience ? Working experience on research vessels ? Experience working from dolphin/whale watching platforms ? Experience in photo-identification ? Professional cameras that can be used for photo-ID ? Availability to stay for longer periods of time *INTERNSHIP APPLICATION: * Applicants should fill up the online application at: www.aimmportugal.org/dolphin-research-internship AIMM will send a confirmation e-mail with all the details about the internship and asking for your Resume/CV, motivation letter (small statement on which are your expectations and why do you want to work with AIMM) and the period of time that you want do the program. OR Applicants should send an e-mail to: interns at aimm-portugal.org, with the subject ?*DOLPHIN RESEARCH INTERNSHIP*?. You will receive and e-mail with the availability and all the others details. Applications will be accepted during all season, however, early application is recommended due to limited vacancies. *Contacts*: interns at aimm-portugal.org | www.aimmportugal.org | -- AIMM - Associa??o para Investiga??o do Meio Marinho / *Marine Environment Research Association* Website: www.aimmportugal.org Youtube: https://Youtube/AIMMPortugal Facebook: https://www.facebook.com/AIMM.org/ Instagram: http://instagram.com/aimmportugal_org Twitter: https://twitter.com/AIMMPortugal -------------- next part -------------- An HTML attachment was scrubbed... URL: From B.J.Godley at exeter.ac.uk Wed Aug 8 09:47:38 2018 From: B.J.Godley at exeter.ac.uk (Godley, Brendan) Date: Wed, 8 Aug 2018 16:47:38 +0000 Subject: [MARMAM] FW: ESR: Call for Submission to Theme Sections; Impact Factor, Reviews, List of #OA MarMam Papers Message-ID: Dear Colleagues (please forward widely) I just wanted to share some info (4 points below) about one of marine mammal conservation research?s favourite journals- Endangered Species Research (ESR), (companion journal to Mar Ecol Prog Series). https://www.int-res.com/journals/esr/esr-home/ 1. Theme Sections: To help consolidate the position of the journal we are launching 4 Special Theme Section in the coming weeks with deadline for submission end 2018 and early 2019. These will all be fully peer reviewed but seek to gather cogent bodies of work around large and/or emerging areas of conservation research. All submissions are welcome. Please let me know the rough title of any paper you would like to submit and when it may be received. As you will see they are all of clear interest to our community. So please forward to your networks and share widely. 1. ?Drones in Conservation Research? 2. ?Marine Pollution and Endangered Species? 3. ?Biologging for Conservation? 4. ?Marine Vertebrate Bycatch: Problems and Solutions? Info on previous Special Theme Sections here: https://www.int-res.com/journals/esr/esr-specials/ 2. Impact Factor: ESR now has an ISI Impact Factor of 2.3. Modest, but rising from 1.8 last year and 1.4 the year before! I have inserted a table below contextualized where we have reached and where our trajectory might be. This is a result of great support from this community as authors, reviewers and editors. So thank you! Conservation Biology 5.890 Biological Conservation 4.660 Conservation Physiology 3.460 Aquatic Conservation 2.988 Animal Conservation 2.889 Biodiversity and Conservation 2.828 Oryx 2.333 Endangered Species Research 2.312 Environmental Conservation 2.293 Marine Ecology Progress Series 2.276 Advances in Marine Biology 2.225 Marine Biology 2.215 3. Reviews: For an open access journal of its standing, we still have fewer integrative reviews than we might. I am always open to suggestions. 4. Marine Mammal Papers: ESR is host to a great many excellent marine mammal papers (>>100 since 2014). I append below a list of recent ones with URL to OA papers. Please review the list and diffuse through your networks so people can build on this excellent work. If anyone would like a word doc of same, contact me and it can be forwarded. With kind regards Brendan Godley (Editor in Chief) Brendan Godley Chair in Conservation Science Centre for Ecology and Conservation (CEC) University of Exeter, Penryn Campus #ExeterMarine Strategy Lead https://www.exeter.ac.uk/research/marine/researchthemes/ Twitter: @BrendanGodley Twitter: @ExeterMarine I recently gave a TEDx Talk ?Sea Turtles: United by Oceans? You can watch it here: https://www.youtube.com/watch?v=UT3PQN9bojc ESR articles - Marine Mammals (2014-present) Forthcoming Krzystan AM, Gowan TA, Kendall WL, Martin J, Ortega-Ortiz JG, Jackson K, Knowlton AR, Naessig P, Zani M, Schulte DW, Taylor CR Characterizing residence patterns of North Atlantic right whales in the southeastern U.S. with a multistate open robust design model Prepress abstract Bradford AL, Baird RW, Mahaffy SD, Gorgone AM, McSweeney DJ, Cullins T, Webster DL, Zerbini AN Abundance estimates for management of endangered false killer whales in the main Hawaiian Islands Prepress abstract Rehberg M, Jemison L, Womble JN, O?Corry-Crowe G Winter movements and long-term dispersal of Steller sea lions in the Glacier Bay region of Southeast Alaska Prepress abstract Ortega-Ortiz CD, G?mez-Mu?oz VM, Gendron D Allometry and morphometry of blue whales photographed in the Gulf of California: insights into subspecies taxonomy in the Eastern North Pacific Prepress abstract 2018 Stanistreet JE, Nowacek DP, Bell JT, Cholewiak DM, Hildebrand JA, Hodge LEW, Van Parijs SM, Read AJ Spatial and seasonal patterns in acoustic detections of sperm whales Physeter macrocephalus along the continental slope in the western North Atlantic Ocean ESR 35:1-13 | Full text in pdf format Hunter ME, Meigs-Friend G, Ferrante JA, Takoukam Kamla A, Dorazio RM, Keith-Diagne L, Luna F, Lanyon JM, Reid JP Surveys of environmental DNA (eDNA): a new approach to estimate occurrence in Vulnerable manatee populations ESR 35:101-111 | Full text in pdf format Varga LM, Wiggins SM, Hildebrand JA Behavior of singing fin whales Balaenoptera physalus tracked acoustically offshore of Southern California ESR 35:113-124 | Full text in pdf format Rodr?guez-Rodr?guez D, Mart?nez-Vega J Representation and protection of threatened biodiversity by the largest Spanish regional network of protected areas ESR 35:125-139 | Full text in pdf format Fearnbach H, Durban JW, Ellifrit DK, Balcomb KC NOTE: Using aerial photogrammetry to detect changes in body condition of endangered southern resident killer whales ESR 35:175-180 | Full text in pdf format Laidre KL, Stern H, Born EW, Heagerty P, Atkinson S, Wiig ?, Lunn NJ, Regehr EV, McGovern R, Dyck M Changes in winter and spring resource selection by polar bears Ursus maritimus in Baffin Bay over two decades of sea-ice loss ESR 36:1-14 | Full text in pdf format Barlow DR, Torres LG, Hodge KB, Steel D, Baker CS, Chandler TE, Bott N, Constantine R, Double MC, Gill P, Glasgow D, Hamner RM, Lilley C, Ogle M, Olson PA, Peters C, Stockin KA, Tessaglia-Hymes CT, Klinck H Documentation of a New Zealand blue whale population based on multiple lines of evidence ESR 36:27-40 | Full text in pdf format Cholewiak D, Clark CW, Ponirakis D, Frankel A, Hatch LT, Risch D, Stanistreet JE, Thompson M, Vu E, Van Parijs SM Communicating amidst the noise: modeling the aggregate influence of ambient and vessel noise on baleen whale communication space in a national marine sanctuary ESR 36:59-75 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Nelson MA, Quakenbush LT, Mahoney BA, Taras BD, Wooller MJ Fifty years of Cook Inlet beluga whale feeding ecology from isotopes in bone and teeth ESR 36:77-87 | Full text in pdf format Carretta JV A machine-learning approach to assign species to ?unidentified? entangled whales ESR 36:89-98 | Full text in pdf format 2017 van der Hoop JM, Nowacek DP, Moore MJ, Triantafyllou MS Swimming kinematics and efficiency of entangled North Atlantic right whales ESR 32:1-17 | Full text in pdf format Pagano AM, Rode KD, Cutting A, Owen MA, Jensen S, Ware JV, Robbins CT, Durner GM, Atwood TC, Obbard ME, Middel KR, Thiemann GW, Williams TM Using tri-axial accelerometers to identify wild polar bear behaviors ESR 32:19-33 | Full text in pdf format Amano M, Kusumoto M, Abe M, Akamatsu T Long-term effectiveness of pingers on a small population of finless porpoises in Japan ESR 32:35-40 | Full text in pdf format Small RJ, Brost B, Hooten M, Castellote M, Mondragon J Potential for spatial displacement of Cook Inlet beluga whales by anthropogenic noise in critical habitat ESR 32:43-57 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Vacqui?-Garcia J, Lydersen C, Marques TA, Aars J, Ahonen H, Skern-Mauritzen M, ?ien N, Kovacs KM Late summer distribution and abundance of ice-associated whales in the Norwegian High Arctic ESR 32:59-70 | Full text in pdf format Hunt TN, Bejder L, Allen SJ, Rankin RW, Hanf D, Parra GJ Demographic characteristics of Australian humpback dolphins reveal important habitat toward the southwestern limit of their range ESR 32:71-88 | Full text in pdf format Norris TA, Littnan CL, Gulland FMD, Baker JD, Harvey JT An integrated approach for assessing translocation as an effective conservation tool for Hawaiian monk seals ESR 32:103-115 | Full text in pdf format Redfern JV, Hatch LT, Caldow C, DeAngelis ML, Gedamke J, Hastings S, Henderson L, McKenna MF, Moore TJ, Porter MB Assessing the risk of chronic shipping noise to baleen whales off Southern California, USA ESR 32:153-167 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Kuhn CE, Chumbley K, Johnson D, Fritz L A re-examination of the timing of pupping for Steller sea lions Eumetopias jubatus breeding on two islands in Alaska ESR 32:213-222 | Full text in pdf format Pettis HM, Rolland RM, Hamilton PK, Knowlton AR, Burgess EA, Kraus SD Body condition changes arising from natural factors and fishing gear entanglements in North Atlantic right whales Eubalaena glacialis ESR 32:237-249 | Full text in pdf format Hieb EE, Carmichael RH, Aven A, Nelson-Seely C, Taylor N Sighting demographics of the West Indian manatee Trichechus manatus in the north-central Gulf of Mexico supported by citizen-sourced data ESR 32:321-332 | Full text in pdf format Lesage V, Omrane A, Doniol-Valcroze T, Mosnier A Increased proximity of vessels reduces feeding opportunities of blue whales in the St. Lawrence Estuary, Canada ESR 32:351-361 | Full text in pdf format Nichol LM, Wright BM, O?Hara P, Ford JKB Risk of lethal vessel strikes to humpback and fin whales off the west coast of Vancouver Island, Canada ESR 32:373-390 | Full text in pdf format Forney KA, Southall BL, Slooten E, Dawson S, Read AJ, Baird RW, Brownell RL Jr Nowhere to go: noise impact assessments for marine mammal populations with high site fidelity ESR 32:391-413 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Reinert TR, Spellman AC, Bassett BL Entanglement in and ingestion of fishing gear and other marine debris by Florida manatees, 1993 to 2012 ESR 32:415-427 | Full text in pdf format Gomez C, Lawson J, Kouwenberg AL, Moors-Murphy H, Buren A, Fuentes-Yaco C, Marotte E, Wiersma YF, Wimmer T Predicted distribution of whales at risk: identifying priority areas to enhance cetacean monitoring in the Northwest Atlantic Ocean ESR 32:437-458 | Full text in pdf format Charrier I, Marchesseau S, Dendrinos P, Tounta E, Karamanlidis AA Individual signatures in the vocal repertoire of the endangered Mediterranean monk seal: new perspectives for population monitoring ESR 32:459-470 | Full text in pdf format Filby NE, Christiansen F, Scarpaci C, Stockin KA Effects of swim-with-dolphin tourism on the behaviour of a threatened species, the Burrunan dolphin Tursiops australis ESR 32:479-490 | Full text in pdf format Birnie-Gauvin K, Walton S, Palme CAD, Manouchehri BA, Venne S, Lennox RJ, Chapman JM, Bennett JR, Cooke SJ OPINION PIECE: Conservation physiology can inform threat assessment and recovery planning processes for threatened species ESR 32:507-513 | Full text in pdf format Soldevilla MS, Hildebrand JA, Frasier KE, Aichinger Dias L, Martinez A, Mullin KD, Rosel PE, Garrison LP Spatial distribution and dive behavior of Gulf of Mexico Bryde?s whales: potential risk of vessel strikes and fisheries interactions ESR 32:533-550 | Full text in pdf format Rosenbaum HC, Kershaw F, Mendez M, Pomilla C, Leslie MS, Findlay KP, Best PB, Collins T, Vely M, Engel MH, Baldwin R, Minton G, Me?er M, Fl?rez-Gonz?lez L, Poole MM, Hauser N, Garrigue C, Brasseur M, Bannister J, Anderson M, Olavarr?a C, Baker CS First circumglobal assessment of Southern Hemisphere humpback whale mitochondrial genetic variation and implications for management ESR 32:551-567 | Full text in pdf format Wallace BP, Brosnan T, McLamb D, Rowles T, Ruder E, Schroeder B, Schwacke L, Stacy B, Sullivan L, Takeshita R, Wehner D OVERVIEW: Effects of the Deepwater Horizon oil spill on protected marine species ESR 33:1-7 | Full text in pdf format Takeshita R, Sullivan L, Smith C, Collier T, Hall A, Brosnan T, Rowles T, Schwacke L REVIEW: The Deepwater Horizon oil spill marine mammal injury assessment ESR 33:95-106 | Full text in pdf format Wilkin SM, Rowles TK, Stratton E, Adimey N, Field CL, Wissmann S, Shigenaka G, Foug?res E, Mase B, Southeast Region Stranding Network, Ziccardi MH Marine mammal response operations during the Deepwater Horizon oil spill ESR 33:107-118 | Full text in pdf format Aichinger Dias L, Litz J, Garrison L, Martinez A, Barry K, Speakman T Exposure of cetaceans to petroleum products following the Deepwater Horizon oil spill in the Gulf of Mexico ESR 33:119-125 | Full text in pdf format Smith CR, Rowles TK, Hart LB, Townsend FI, Wells RS, Zolman ES, Balmer BC, Quigley B, Ivanc?ic? M, McKercher W, Tumlin MC, Mullin KD, Adams JD, Wu Q, McFee W, Collier TK, Schwacke LH Slow recovery of Barataria Bay dolphin health following the Deepwater Horizon oil spill (2013?2014), with evidence of persistent lung disease and impaired stress response ESR 33:127-142 | Full text in pdf format Kellar NM, Speakman TR, Smith CR, Lane SM, Balmer BC, Trego ML, Catelani KN, Robbins MN, Allen CD, Wells RS, Zolman ES, Rowles TK, Schwacke LH Low reproductive success rates of common bottlenose dolphins Tursiops truncatus in the northern Gulf of Mexico following the Deepwater Horizon disaster (2010?2015) ESR 33:143-158 | Full text in pdf format Wells RS, Schwacke LH, Rowles TK, Balmer BC, Zolman E, Speakman T, Townsend FI, Tumlin MC, Barleycorn A, Wilkinson KA Ranging patterns of common bottlenose dolphins Tursiops truncatus in Barataria Bay, Louisiana, following the Deepwater Horizon oil spill ESR 33:159-180 | Full text in pdf format Hornsby FE, McDonald TL, Balmer BC, Speakman TR, Mullin KD, Rosel PE, Wells RS, Telander AC, Marcy PW, Schwacke LH Using salinity to identify common bottlenose dolphin habitat in Barataria Bay, Louisiana, USA ESR 33:181-192 | Full text in pdf format McDonald TL, Hornsby FE, Speakman TR, Zolman ES, Mullin KD, Sinclair C, Rosel PE, Thomas L, Schwacke LH Survival, density, and abundance of common bottlenose dolphins in Barataria Bay (USA) following the Deepwater Horizonoil spill ESR 33:193-209 | Full text in pdf format Fauquier DA, Litz J, Sanchez S, Colegrove K, Schwacke LH, Hart L, Saliki J, Smith C, Goldstein T, Bowen-Stevens S, McFee W, Fougeres E, Mase-Guthrie B, Stratton E, Ewing R, Venn-Watson S, Carmichael RH, Clemons-Chevis C, Hatchett W, Shannon D, Shippee S, Smith S, Staggs L, Tumlin MC, Wingers NL, Rowles TK Evaluation of morbillivirus exposure in cetaceans from the northern Gulf of Mexico 2010?2014 ESR 33:211-220 | Full text in pdf format Rosel PE, Wilcox LA, Sinclair C, Speakman TR, Tumlin MC, Litz JA, Zolman ES Genetic assignment to stock of stranded common bottlenose dolphins in southeastern Louisiana after the Deepwater Horizon oil spill ESR 33:221-234 | Full text in pdf format Hohn AA, Thomas L, Carmichael RH, Litz J, Clemons-Chevis C, Shippee SF, Sinclair C, Smith S, Speakman TR, Tumlin MC, Zolman ES Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill ESR 33:235-252 | Full text in pdf format Thomas L, Booth CG, Rosel PE, Hohn A, Litz J, Schwacke LH Where were they from? Modelling the source stock of dolphins stranded after the Deepwater Horizon oil spill using genetic and stable isotope data ESR 33:253-264 | Full text in pdf format Schwacke LH, Thomas L, Wells RS, McFee WE, Hohn AA, Mullin KD, Zolman ES, Quigley BM, Rowles TK, Schwacke JH Quantifying injury to common bottlenose dolphins from the Deepwater Horizon oil spill using an age-, sex- and class-structured population model ESR 33:265-279 | Full text in pdf format De Guise S, Levin M, Gebhard E, Jasperse L, Burdett Hart L, Smith CR, Venn-Watson S, Townsend F, Wells R, Balmer B, Zolman E, Rowles T, Schwacke L Changes in immune functions in bottlenose dolphins in the northern Gulf of Mexico associated with the Deepwater Horizonoil spill ESR 33:291-303 | Full text in pdf format Bas AA, Christiansen F, ?zt?rk B, ?zt?rk AA, Erdo?an MA, Watson LJ Marine vessels alter the behaviour of bottlenose dolphins Tursiops truncatus in the Istanbul Strait, Turkey ESR 34:1-14 | Full text in pdf format Holt MM, Hanson MB, Giles DA, Emmons CK, Hogan JT Noise levels received by endangered killer whales Orcinus orca before and after implementation of vessel regulations ESR 34:15-26 | Full text in pdf format Lesage V, Gavrilchuk K, Andrews RD, Sears R Foraging areas, migratory movements and winter destinations of blue whales from the western North Atlantic ESR 34:27-43 | Full text in pdf format Leiter SM, Stone KM, Thompson JL, Accardo CM, Wikgren BC, Zani MA, Cole TVN, Kenney RD, Mayo CA, Kraus SD North Atlantic right whale Eubalaena glacialis occurrence in offshore wind energy areas near Massachusetts and Rhode Island, USA ESR 34:45-59 | Full text in pdf format Tezanos-Pinto G, Hupman K, Wiseman N, Dwyer SL, Baker CS, Brooks L, Outhwaite B, Lea C, Stockin KA Local abundance, apparent survival and site fidelity of Bryde?s whales in the Hauraki Gulf (New Zealand) inferred from long-term photo-identification ESR 34:61-73 | Full text in pdf format Williams R, Ashe E, Gaut K, Gryba R, Moore JE, Rexstad E, Sandilands D, Steventon J, Reeves RR Animal Counting Toolkit: a practical guide to small-boat surveys for estimating abundance of coastal marine mammals ESR 34:149-165 | Full text in pdf format Villegas-Amtmann S, Schwarz LK, Gailey G, Sychenko O, Costa DP East or west: the energetic cost of being a gray whale and the consequence of losing energy to disturbance ESR 34:167-183 | Full text in pdf format Rivera CJ NOTE: Exploitation of endangered mammals in the United States ESR 34:185-190 | Full text in pdf format Crance JL, Berchok CL, Keating JL Gunshot call production by the North Pacific right whale Eubalaena japonica in the southeastern Bering Sea ESR 34:251-267 | Full text in pdf format Liukkonen L, Rautio A, Sipil? T, Niemi M, Auttila M, Koskela J, Kunnasranta M Long-term effects of land use on perinatal mortality in the Endangered Saimaa ringed seal population ESR 34:283-291 | Full text in pdf format Frankel AS, Gabriele CM Predicting the acoustic exposure of humpback whales from cruise and tour vessel noise in Glacier Bay, Alaska, under different management strategies ESR 34:397-415 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Rolland RM, McLellan WA, Moore MJ, Harms CA, Burgess EA, Hunt KE Fecal glucocorticoids and anthropogenic injury and mortality in North Atlantic right whales Eubalaena glacialis ESR 34:417-429 | Full text in pdf format 2016 Racca R, Austin M, Rutenko A, Br?ker K Monitoring the gray whale sound exposure mitigation zone and estimating acoustic transmission during a 4-D seismic survey, Sakhalin Island, Russia ESR 29:131-146 | Full text in pdf format Theme Section: Seismic survey and western gray whales Muir JE, Joy R, Bychkov Y, Br?ker K, Gailey G, Vladmirov V, Starodymov S, Yakovlev Y Delineation of a coastal gray whale feeding area using opportunistic and systematic survey effort ESR 29:147-160 | Full text in pdf format Theme Section: Seismic survey and western gray whales Muir JE, Ainsworth L, Joy R, Racca R, Bychkov Y, Gailey G, Vladimirov V, Starodymov S, Br?ker K Distance from shore as an indicator of disturbance of gray whales during a seismic survey off Sakhalin Island, Russia ESR 29:161-178 | Full text in pdf format Theme Section: Seismic survey and western gray whales Pirotta V, Slip D, Jonsen ID, Peddemors VM, Cato DH, Ross G, Harcourt R Migrating humpback whales show no detectable response to whale alarms off Sydney, Australia ESR 29:201-209 | Full text in pdf format Muir JE, Ainsworth L, Racca R, Bychkov Y, Gailey G, Vladimirov V, Starodymov S, Br?ker K Gray whale densities during a seismic survey off Sakhalin Island, Russia ESR 29:211-227 | Full text in pdf format Theme Section: Seismic survey and western gray whales Brough TE, Henderson S, Guerra M, Dawson SM Factors influencing heterogeneity in female reproductive success in a Critically Endangered population of bottlenose dolphins ESR 29:255-270 | Full text in pdf format Wedding LM, Maxwell SM, Hyrenbach D, Dunn DC, Roberts JJ, Briscoe D, Hines E, Halpin PN OVERVIEW: Geospatial approaches to support pelagic conservation planning and adaptive management ESR 30:1-9 | Full text in pdf format Theme Section: Geospatial approaches to support pelagic conservation planning and adaptive management Cooke SJ, Nguyen VM, Wilson ADM, Donaldson MR, Gallagher AJ, Hammerschlag N, Haddaway NR AS WE SEE IT: The need for speed in a crisis discipline: perspectives on peer-review duration and implications for conservation science ESR 30:11-18 | Full text in pdf format Koivuniemi M, Auttila M, Niemi M, Lev?nen R, Kunnasranta M Photo-ID as a tool for studying and monitoring the endangered Saimaa ringed seal ESR 30:29-36 | Full text in pdf format Zeh DR, Heupel MR, Hamann M, Limpus CJ, Marsh H Quick Fix GPS technology highlights risk to dugongs moving between protected areas ESR 30:37-44 | Full text in pdf format Gailey G, Sychenko O, McDonald T, Racca R, Rutenko A, Br?ker K Behavioural responses of western gray whales to a 4-D seismic survey off northeastern Sakhalin Island, Russia ESR 30:53-71 | Full text in pdf format Theme Section: Seismic survey and western gray whales Ellison WT, Racca R, Clark CW, Streever B, Frankel AS, Fleishman E, Angliss R, Berger J, Ketten D, Guerra M, Leu M, McKenna M, Sformo T, Southall B, Suydam R, Thomas L Modeling the aggregated exposure and responses of bowhead whales Balaena mysticetus to multiple sources of anthropogenic underwater sound ESR 30:95-108 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise McCordic JA, Root-Gutteridge H, Cusano DA, Denes SL, Parks SE Calls of North Atlantic right whales Eubalaena glacialis contain information on individual identity and age class ESR 30:157-169 | Full text in pdf format Hatch LT, Wahle CM, Gedamke J, Harrison J, Laws B, Moore SE, Stadler JH, Van Parijs SM Can you hear me here? Managing acoustic habitat in US waters ESR 30:171-186 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Nelson MP, Vucetich JA, Bruskotter JT COMMENT: Ecological value and the US Endangered Species Act: Comment on Waples et al. (2015) ESR 30:187-190 | Full text in pdf format Waples RS, Adams PB, Bohnsack JA, Taylor BL REPLY COMMENT: What is a ?significant portion? of a range? Reply to Nelson et al. (2016) ESR 30:191-192 | Full text in pdf format Barnes CJ, Butcher PA, Macbeth WG, Mandelman JW, Smith SDA, Peddemors VM Movements and mortality of two commercially exploited carcharhinid sharks following longline capture and release off eastern Australia ESR 30:193-208 | Full text in pdf format Williams SH, Gende SM, Lukacs PM, Webb K Factors affecting whale detection from large ships in Alaska with implications for whale avoidance ESR 30:209-223 | Full text in pdf format Tennessen JB, Parks SE Acoustic propagation modeling indicates vocal compensation in noise improves communication range for North Atlantic right whales ESR 30:225-237 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Thomisch K, Boebel O, Clark CW, Hagen W, Spiesecke S, Zitterbart DP, Van Opzeeland I Spatio-temporal patterns in acoustic presence and distribution of Antarctic blue whales Balaenoptera musculus intermediain the Weddell Sea ESR 30:239-253 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Estabrook BJ, Ponirakis DW, Clark CW, Rice AN Widespread spatial and temporal extent of anthropogenic noise across the northeastern Gulf of Mexico shelf ecosystem ESR 30:267-282 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Pavanato HJ, Melo-Santos G, Lima DS, Portocarrero-Aya M, Paschoalini M, Mosquera F, Trujillo F, Meneses R, Marmontel M, Maretti C Risks of dam construction for South American river dolphins: a case study of the Tapaj?s River ESR 31:47-60 | Full text in pdf format Cur? C, Isojunno S, Visser F, Wensveen PJ, Sivle LD, Kvadsheim PH, Lam FPA, Miller PJO Biological significance of sperm whale responses to sonar: comparison with anti-predator responses ESR 31:89-102 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Pierszalowski SP, Gabriele CM, Steel DJ, Neilson JL, Vanselow PBS, Cedarleaf JA, Straley JM, Baker CS Local recruitment of humpback whales in Glacier Bay and Icy Strait, Alaska, over 30 years ESR 31:177-189 | Full text in pdf format Dahlheim M, Castellote M Changes in the acoustic behavior of gray whales Eschrichtius robustus in response to noise ESR 31:227-242 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Watt CA, Orr J, Ferguson SH A shift in foraging behaviour of beluga whales Delphinapterus leucas from the threatened Cumberland Sound population may reflect a changing Arctic food web ESR 31:259-270 | Full text in pdf format McKenna MF, Shannon G, Fristrup K Characterizing anthropogenic noise to improve understanding and management of impacts to wildlife ESR 31:279-291 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Southall BL, Nowacek DP, Miller PJO, Tyack PL REVIEW: Experimental field studies to measure behavioral responses of cetaceans to sonar ESR 31:293-315 | Full text in pdf format Theme Section: 21st century paradigms for measuring and managing the effects of anthropogenic ocean noise Baker JD, Harting AL, Johanos TC, Littnan CL Estimating Hawaiian monk seal range-wide abundance and associated uncertainty ESR 31:317-324 | Full text in pdf format 2015 Br?ker K, Gailey G, Muir J, Racca R Monitoring and impact mitigation during a 4D seismic survey near a population of gray whales off Sakhalin Island, Russia ESR 28:187-208 Dmitrieva L, H?rk?nen T, Baimukanov M, Bignert A, J?ssi I, J?ssi M, Kasimbekov Y, Verevkin M, Vysotskiy V, Wilson S, Goodman SJ Inter-year variation in pup production of Caspian seals Pusa caspica2005-2012 determined from aerial surveys ESR 28:209-223 Hodge KB, Muirhead CA, Morano JL, Clark CW, Rice AN North Atlantic right whale occurrence near wind energy areas along the mid-Atlantic US coast: implications for management ESR 28:225-234 Osterrieder SK, Salgado Kent C, Robinson RW Variability in haul-out behaviour by male Australian sea lions Neophoca cinerea in the Perth metropolitan area, Western Australia ESR 28:259-274 Baumann-Pickering S, Simonis AE, Oleson EM, Baird RW, Roch MA, Wiggins SM False killer whale and short-finned pilot whale acoustic identification ESR 28:97-108 Carroll EL, Brooks L, Baker CS, Burns D, Garrigue C, Hauser N, Jackson JA, Poole MM, Fewster RM Assessing the design and power of capture?recapture studies to estimate demographic parameters for the Endangered Oceania humpback whale population ESR 28:147-162 ?irovi? A, Rice A, Chou E, Hildebrand JA, Wiggins SM, Roch MA Seven years of blue and fin whale call abundance in the Southern California Bight ESR 28:61-76 Whitehead H, Gero S Conflicting rates of increase in the sperm whale population of the eastern Caribbean: positive observed rates do not reflect a healthy population ESR 27:207-218 McKenna MF, Calambokidis J, Oleson EM, Laist DW, Goldbogen JA Simultaneous tracking of blue whales and large ships demonstrates limited behavioral responses for avoiding collision ESR 27:219-232 Parsons ECM, Baulch S, Bechshoft T, Bellazzi G, Bouchet P, Cosentino AM, Godard-Codding CAJ, Gulland F, Hoffmann-Kuhnt M, Hoyt E, Livermore S, MacLeod CD, Matrai E, Munger L, Ochiai M, Peyman A, Recalde-Salas A, Regnery R, Rojas-Bracho L, Salgado-Kent CP, Slooten E, Wang JY, Wilson SC, Wright AJ, Young S, Zwamborn E, Sutherland WJ (2015) NOTE: Key research questions of global importance for cetacean conservation ESR 27:113-118 Forney KA, Becker EA, Foley DG, Barlow J, Oleson EM Habitat-based models of cetacean density and distribution in the central North Pacific ESR 27:1-20 Gendron D, Martinez Serrano I, Ugalde de la Cruz A, Calambokidis J, Mate B Long-term individual sighting history database: an effective tool to monitor satellite tag effects on cetaceans ESR 26:235-241 Miller BS, Barlow J, Calderan S, Collins K, Leaper R, Olson P, Ensor P, Peel D, Donnelly D, Andrews-Goff V, Olavarria C, Owen K, Rekdahl M, Schmitt N, Wadley V, Gedamke J, Gales N, Double MC Validating the reliability of passive acoustic localisation: a novel method for encountering rare and remote Antarctic blue whales ESR 26:257-269 Bort J, Van Parijs SM, Stevick PT, Summers E, Todd S North Atlantic right whale Eubalaena glacialis vocalization patterns in the central Gulf of Maine from October 2009 through October 2010 ESR 26:271-280 Prieto R, Silva MA, Waring GT, Gon?alves JMA Sei whale movements and behaviour in the North Atlantic inferred from satellite telemetry ESR 26:103-113 Pace RM III, Cole TVN, Henry AG Incremental fishing gear modifications fail to significantly reduce large whale serious injury rates ESR 26:115-126 Calleson CS Issues and opportunities associated with using manatee mortality data to evaluate the effectiveness of manatee protection efforts in Florida ESR 26:127-136 Huang SL, Chang WL, Karczmarski L Population trends and vulnerability of humpback dolphins Sousa chinensis off the west coast of Taiwan ESR 26:147-159 2014 Crossman CA, Barrett-Lennard LG, Taylor EB Population structure and intergeneric hybridization in harbour porpoises Phocoena phocoena in British Columbia, Canada ESR 26:1-12 Fritz LW, Towell R, Gelatt TS, Johnson DS, Loughlin TR Recent increases in survival of western Steller sea lions in Alaska and implications for recovery ESR 26:13-24 Dransfield A, Hines E, McGowan J, Holzman B, Nur N, Elliott M, Howar J, Jahncke J Where the whales are: using habitat modeling to support changes in shipping regulations within National Marine Sanctuaries in Central California ESR 26:39-57 Hamner RM, Wade P, Oremus M, Stanley M, Brown P, Constantine R, Baker CS NOTE: Critically low abundance and limits to human-related mortality for the Maui?s dolphin ESR 26:87-92 Ivashchenko YV, Brownell RL Jr, Clapham PJ Distribution of Soviet catches of sperm whales Physeter macrocephalus in the North Pacific ESR 25:249-263 O?Neill SM, Ylitalo GM, West JE Energy content of Pacific salmon as prey of northern and southern resident killer whales ESR 25:265-281 Dwyer SL, Tezanos-Pinto G, Visser IN, Pawley MDM, Meissner AM, Berghan J, Stockin KA Overlooking a potential hotspot at Great Barrier Island for the nationally endangered bottlenose dolphin of New Zealand ESR 25:97-114 Soldevilla MS, Rice AN, Clark CW, Garrison LP Passive acoustic monitoring on the North Atlantic right whale calving grounds ESR 25:115-140 Moore JE, Barlow JP Improved abundance and trend estimates for sperm whales in the eastern North Pacific from Bayesian hierarchical modeling ESR 25:141-150 Rosel PE, Wilcox LA Genetic evidence reveals a unique lineage of Bryde?s whales in the northern Gulf of Mexico ESR 25:19-34 Harcourt R, Pirotta V, Heller G, Peddemors V, Slip D A whale alarm fails to deter migrating humpback whales: an empirical test ESR 25:35-42 Harting AL, Johanos TC, Littnan CL Benefits derived from opportunistic survival-enhancing interventions for the Hawaiian monk seal: the silver BB paradigm ESR 25:89-96 Guerra M, Dawson SM, Brough TE, Rayment WJ Effects of boats on the surface and acoustic behaviour of an endangered population of bottlenose dolphins ESR 24:221-236 Briscoe DK, Hiatt S, Lewison R, Hines E Modeling habitat and bycatch risk for dugongs in Sabah, Malaysia ESR 24:237-247 Lopez J, Hyrenbach KD, Littnan C, Ylitalo GM Geographic variation of persistent organic pollutants in Hawaiian monk seals Monachus schauinslandi in the main Hawaiian Islands ESR 24:249-262 Ara?jo CC, Wang JY, Hung SK, White BN, Brito D Viability of the Critically Endangered eastern Taiwan Strait population of Indo-Pacific humpback dolphins Sousa chinensis ESR 24:263-271 Straley JM, Schorr GS, Thode AM, Calambokidis J, Lunsford CR, Chenoweth EM, O?Connell VM, Andrews RD Depredating sperm whales in the Gulf of Alaska: local habitat use and long distance movements across putative population boundaries ESR 24:125-135 Montero-Serra I, P?ez-Rosas D, Murillo JC, Vegas-Vilarr?bia T, Fietz K, Denkinger J Environment-driven changes in terrestrial habitat use and distribution of the Galapagos sea lion ESR 24:9-19 Wikgren B, Kite-Powell H, Kraus S Modeling the distribution of the North Atlantic right whale Eubalaena glacialis off coastal Maine by areal co-kriging ESR 24:21-31 Carroll G, Hedley S, Bannister J, Ensor P, Harcourt R No evidence for recovery in the population of sperm whale bulls off Western Australia, 30 years post-whaling ESR 24:33-43 Kobayashi Y, Kariya T, Chishima J, Fujii K, Wada K, Baba S, Itoo T, Nakaoka T, Kawashima M, Saito S, Aoki N, Hayama Si, Osa Y, Osada H, Niizuma A, Suzuki M, Uekane Y, Hayashi K, Kobayashi M, Ohtaishi N, Sakurai Y Population trends of the Kuril harbour seal Phoca vitulina stejnegeri from 1974 to 2010 in southeastern Hokkaido, Japan ESR 24:61-72 Buchan SJ, Hucke-Gaete R, Rendell L, Stafford KM A new song recorded from blue whales in the Corcovado Gulf, Southern Chile, and an acoustic link to the Eastern Tropical Pacific ESR 23:241-252 Ramp C, Delarue J, B?rub? M, Hammond PS, Sears R Fin whale survival and abundance in the Gulf of St. Lawrence, Canada ESR 23:125-132 Laist DW, Knowlton AR, Pendleton D Effectiveness of mandatory vessel speed limits for protecting North Atlantic right whales ESR 23:133-147 Kennedy AS, Zerbini AN, Rone BK, Clapham PJ Individual variation in movements of satellite-tracked humpback whales Megaptera novaeangliae in the eastern Aleutian Islands and Bering Sea ESR 23:187-195 Becker EA, Forney KA, Foley DG, Smith RC, Moore TJ, Barlow J Predicting seasonal density patterns of California cetaceans based on habitat models ESR 23:1-22 Pusineri C, Barbraud C, Kiszka J, Caceres S, Mougnot J, Daudin G, Ridoux V Capture-mark-recapture modelling suggests an Endangered status for the Mayotte Island (eastern Africa) population of Indo-Pacific bottlenose dolphins ESR 23:23-33 Bower DS, Pickett EJ, Garnham JI, Deboo ML, McCurry MR, Mengerink RM, Mahony MJ, Clulow J Diet of a threatened pond frog differs over a small spatial scale ESR 23:93-98 Gregr EJ, Baumgartner MF, Laidre KL, Palacios DM OVERVIEW: Marine mammal habitat models come of age: the emergence of ecological and management relevance ESR 22:205-212 Ryan C, McHugh B, Boyle B, McGovern E, B?rub? M, Lopez-Su?rez P, Elfes CT, Boyd DT, Ylitalo GM, Van Blaricom GR, Clapham PJ, Robbins J, Palsb?ll PJ, O?Connor I, Berrow SD Levels of persistent organic pollutants in eastern North Atlantic humpback whales ESR 22:213-223 Slooten E, Wang JY, Dungan SZ, Forney KA, Hung SK, Jefferson TA, Riehl KN, Rojas-Bracho L, Ross PS, Wee A, Winkler R, Yang SC, Chen CA Impacts of fisheries on the Critically Endangered humpback dolphin Sousa chinensis population in the eastern Taiwan Strait ESR 22:99-114 Niemi M, Auttila M, Valtonen A, Viljanen M, Kunnasranta M Haulout patterns of Saimaa ringed seals and their response to boat traffic during the moulting season ESR 22:115-124 Wilson B, Benjamins S, Elliott J Using drifting passive echolocation loggers to study harbour porpoises in tidal-stream habitats ESR 22:125-143 Sears R, Ramp C, Douglas AB, Calambokidis J Reproductive parameters of eastern North Pacific blue whales Balaenoptera musculus ESR 22:23-31 Acevedo J, Haro D, Dalla Rosa L, Aguayo-Lobo A, Hucke-Gaete R, Secchi E, Plana J, Pastene LA NOTE: Evidence of spatial structuring of eastern South Pacific humpback whale feeding grounds ESR 22:33-38 Kellar NM, Keliher J, Trego ML, Catelani KN, Hanns C, George JCC, Rosa C Variation of bowhead whale progesterone concentrations across demographic groups and sample matrices ESR 22:61-72 -------------- next part -------------- An HTML attachment was scrubbed... URL: From eduardo.morteo at gmail.com Thu Aug 9 04:29:28 2018 From: eduardo.morteo at gmail.com (Eduardo Morteo) Date: Thu, 9 Aug 2018 06:29:28 -0500 Subject: [MARMAM] New publication: Artisanal fisheries depredation by bottlenose dolphins in the Southwestern Gulf of Mexico... Message-ID: Dear MARMAM Readers, On behalf of my co-authors, I am pleased to share our recent publication, which will be available in the next issue of Aquatic Mammals: Rechimont M.E., Lara-Dom?nguez A.L., Morteo E., Mart?nez-Serrano I., Equihua M. En prensa. Depredation by coastal bottlenose dolphins (Tursiops truncatus) in the southwestern Gulf of Mexico in relation to fishing techniques. Aquatic Mammals 44(5):458-470. ISSN: 1996-7292, doi: 10.1578/AM.44.5.2018.458 Abstract: Cetacean?fishery interactions are a recurring problem. These interactions are conflict prone, especially between fishers and those seeking marine mammal conservation. In the southwestern Gulf of Mexico, a large fleet of artisanal fisheries operates using a range of different techniques. We recorded 90 fishing operations in two different fishing areas of Veracruz, Mexico, between 2009- 2010 and 2014-2015, assessing whether dolphin interaction negatively affects fish catch and fish gear. These potential impacts were evaluated using three generalized linear models (GLMs) hypothesizing that (1) depredation decreases catch per unit effort (CPUE), (2) the predator presence modifies catch composition, and (3) prey species presence increases the likelihood of depredation. Of the gillnet hauls analyzed, 27 were subject to depredation by bottlenose dolphins, despite conditions and fishing methods varying among sites. Higher CPUE attracts larger pods, but a negative effect by depredation was not detected. We also found that depredation probability increased when there were higher capture volumes, when mackerels and jacks were present, and when operations were most southwesterly. Despite the short distance (< 80 km) between sites, we found that bottlenose dolphins on each site displayed different feeding behaviors towards fishing nets. Regarding conservation, bycatch caused by dolphins does not seem to be problematic. In fact, the increase in boat traffic and declining prey abundances due to overfishing could be the main causes of fishers? economic loss. Dolphin?fishery interactions may not represent an actual challenge for marine conservation managers, but stakeholders, fisheries, and governmental institutions should be aware that diminishing returns due to overfishing could exacerbate the apparently false notion of dolphins competing for the fish. Key Words: catch composition, fishing gear, CPUE, interactions, PNSAV-Marine Protected Area, Veracruz Please email me if you want to have an advanced "In press" copy of the manuscript at: eduardo.morteo at gmail.com Thanks! Eduardo Morteo, Dr. Head Researcher Level C Marine Mammal Laboratory (LabMMar, IIB-ICIMAP) Institute of Biological Research Universidad Veracruzana Calle Dr. Castelazo Ayala S/N, Col. Industrial ?nimas, Xalapa, Veracruz, Mexico, CP 91190. Ph/Tel: +52 (228) 841 89 00 E-mail: emorteo at uv.mx http://www.uv.mx/personal/emorteo/ http://uv-mx.academia.edu/EMorteo https://www.researchgate.net/profile/Eduardo_Morteo/?ev=hdr_xprf http://scholar.google.com.mx/citations?user=fDUl-IIAAAAJ -------------- next part -------------- An HTML attachment was scrubbed... URL: From L.L.IJsseldijk at uu.nl Tue Aug 7 23:39:31 2018 From: L.L.IJsseldijk at uu.nl (IJsseldijk, L.L. (Lonneke)) Date: Wed, 8 Aug 2018 06:39:31 +0000 Subject: [MARMAM] New publication: An extensive study on the largest recorded sperm whale mortality event in the North Sea Message-ID: <6BC1BCED8C004745BF5CE50DD7366CEA47B3F892@WP0045.soliscom.uu.nl> Dear all, My co-authors and I are happy to announce our new publication on the sperm whale mortality event that occurred around the North Sea in 2016 and involved 30 sperm whales and five countries. Citation: Lonneke L. IJsseldijk, Abbo van Neer, Rob Deaville, Lineke Begeman, Marco van de Bildt, Judith M.A. van den Brand, Andrew Brownlow, Richard Czeck, Willy Dabin, Mariel ten Doeschate, Vanessa Herder, Helena Herr, Jooske IJzer, Thierry Jauniaux, Lasse Fast Jensen, Paul D. Jepson, Wendy Karen Jo, Jan Lakemeyer, Kristina Lehnert, Mardik F. Leopold, Albert Osterhaus, Matthew W. Perkins, Uwe Piatkowski, Ellen Prenger-Berninghoff, Ralf Pund, Peter Wohlsein, Andrea Gr?ne & Ursula Siebert, Beached bachelors: An extensive study on the largest recorded sperm whale Physeter macrocephalus mortality event in the North Sea, PLOS ONE, DOI: 10.1371/journal.pone.0201221 Abstract: Between the 8th January and the 25th February 2016, the largest sperm whale Physeter macrocephalus mortality event ever recorded in the North Sea occurred with 30 sperm whales stranding in five countries within six weeks. All sperm whales were immature males. Groups were stratified by size, with the smaller animals stranding in the Netherlands, and the largest in England. The majority (n = 27) of the stranded animals were necropsied and/or sampled, allowing for an international and comprehensive investigation into this mortality event. The animals were in fair to good nutritional condition and, aside from the pathologies caused by stranding, did not exhibit significant evidence of disease or trauma. Infectious agents were found, including various parasite species, several bacterial and fungal pathogens and a novel alphaherpesvirus. In nine of the sperm whales a variety of marine litter was found. However, none of these findings were considered to have been the primary cause of the stranding event. Potential anthropogenic and environmental factors that may have caused the sperm whales to enter the North Sea were assessed. Once sperm whales enter the North Sea and head south, the water becomes progressively shallower (<40 m), making this region a global hotspot for sperm whale strandings. We conclude that the reasons for sperm whales to enter the southern North Sea are the result of complex interactions of extrinsic environmental factors. As such, these large mortality events seldom have a single ultimate cause and it is only through multidisciplinary, collaborative approaches that potentially multifactorial large-scale stranding events can be effectively investigated. The publication is open access and can be downloaded from: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0201221 Kind regards, Lonneke IJsseldijk Lonneke L. IJsseldijk, MSc Project Manager Cetacean Research Faculty of Veterinary Medicine, Utrecht University Department of Pathobiology T +31 30 253 5312, M +31 6 244 556 98 Website: http://www.uu.nl/strandingsonderzoek Instagram: https://www.instagram.com/strandingresearch/ -------------- next part -------------- An HTML attachment was scrubbed... URL: From wojtek.bachara at gmail.com Wed Aug 8 07:23:49 2018 From: wojtek.bachara at gmail.com (Wojtek Bachara) Date: Wed, 8 Aug 2018 16:23:49 +0200 Subject: [MARMAM] New publication on Gervais' beaked whales in Cabo Verde Message-ID: Dear Readers, We are pleased to announce a new article in the Zoologia Caboverdiana on the Gervais' beaked whale sightings and strandings in Cabo Verde. No abstract available. The paper can be found here: http://www.scvz.org/zoolcv/vol7no1.html Citation: Bachara, W., Berrow, S., L?pez Su?rez, P., Dias, D. and S. S. Rat?o. 2018 Stranding and sighting records of Gervais? beaked whale in Cabo Verde. Zoologia Caboverdiana 7/1 Best wishes, Wojtek Bachara ziphiid at gmail.com http://independent.academia.edu/WojtekBachara https://www.facebook.com/wojtek.bachara -------------- next part -------------- An HTML attachment was scrubbed... URL: From abostwick at psocertifications.com Sat Aug 11 10:16:59 2018 From: abostwick at psocertifications.com (Angela Bostwick) Date: Sat, 11 Aug 2018 07:16:59 -1000 Subject: [MARMAM] PSO / MMO Training in Long Beach, CA October 6-7 Message-ID: <7f1253eb81c1b4fe33a3e9c179e16549@psocertifications.com> MPSC is holding a training course in Long Beach, CA which provides Protected Species Observer (also known as Marine Mammal Observer) certification on October 6-7. This class will include a whale-watching trip with the Aquarium of the Pacific in southern California, an area which hosts an incredible diversity of marine mammals. Potential sightings include fin whales, gray whales, mink whales, sea lions, and Risso's, common, bottlenose, and Pacific white-sided dolphins. This will provide experience in locating and identifying protected species at sea, as well as practice in methods for professional wildlife photography. This training is approved by the federal agencies Bureau of Ocean Energy Management and the Bureau of Safety & Environmental Enforcement to provide Protected Species Observer certification for seismic surveys, and is often accepted in various other industries and regions where mitigation for protected species is needed. PSOs monitor for marine mammals and sea turtles, and advise on the measures required to reduce impacts to the animals worldwide. The course examines the regulations for reducing impacts to marine mammals and sea turtles, how to visually locate and identify the animals, and objectively documenting animal behavior. Course cost includes various identification guides and regulatory documents (yours to keep), lunch each day, advice on applying to PSO positions, the cruise to the marine sanctuary, and the professional certification. Additional information may be found on the MPSC website at http://www.protectedspeciesobservers.com/, by contacting me at ABostwick at PSOCertifications.com, or by phone at 832-523-2402. Thank you, Angela Bostwick Founder / Marine Protected Species Consulting ProtectedSpeciesObservers.com https://Facebook.com/ProtectedSpeciesObservers/ From kim.parsons at noaa.gov Fri Aug 10 11:08:16 2018 From: kim.parsons at noaa.gov (Kim M Parsons) Date: Fri, 10 Aug 2018 11:08:16 -0700 Subject: [MARMAM] New paper using eDNA to study population genetic structure of harbor porpoise in Alaska Message-ID: We are pleased to announce our recent publication in Royal Society Open Science using eDNA to generate population level sequence data to address the population structure of harbor porpoise in southeast Alaska. Link to the full manuscript can be found here: http://rsos.royalsocietypublishing.org/cgi/content/abstract/rsos.180537 *Abstract:* Determining management units for natural populations is critical for effective conservation and management. However, collecting the requisite tissue samples for population genetic analyses remains the primary limiting factor for a number of marine species. The harbour porpoise (/Phocoena phocoena/), one of the smallest cetaceans in the Northern Hemisphere, is a primary example. These elusive, highly mobile small animals confound traditional approaches of collecting tissue samples for genetic analyses, yet their nearshore habitat makes them highly vulnerable to fisheries by-catch and the effects of habitat degradation. By exploiting the naturally shed cellular material in seawater and the power of next-generation sequencing, we develop a novel approach for generating population specific mitochondrial sequence data from environmental DNA (eDNA) using surface seawater samples. Indications of significant genetic differentiation within a currently recognized management stock highlights the need for dedicated eDNA sampling throughout the population?s range in southeast Alaska. This indirect sampling tactic for characterizing stock structure of small and endangered marine mammals has the potential to revolutionize population assessment for otherwise inaccessible marine taxa. Cheers, Kim -- Kim M. Parsons, Ph.D. Research Biologist Marine Mammal Laboratory NOAA, Alaska Fisheries Science Center 7600 Sand Point Way NE Seattle, WA 98115 AND Conservation Genetics NOAA, Northwest Fisheries Science Center 2725 Montlake Blvd E Seattle, WA 98112 cell phone 206 661 5446 lab phone 206 302 2428 kim.parsons at noaa.gov http://www.afsc.noaa.gov/nmml/personnel/nmmlprofile.php?name=Kim.Parsons https://scholar.google.com/citations?hl=en&user=8unbZEYAAAAJ&view_op=list_works&sortby=pubdate [NGOS - Government Contractor for Marine Mammal Laboratory, AFSC NOAA] "There is no science without fancy, and no art without facts." S.J. Gould -------------- next part -------------- An HTML attachment was scrubbed... URL: From kev.robinson at crru.org.uk Sun Aug 12 01:35:00 2018 From: kev.robinson at crru.org.uk (Dr Kevin Robinson) Date: Sun, 12 Aug 2018 09:35:00 +0100 Subject: [MARMAM] CRRU Summer Field Courses 2018 Message-ID: <012a01d43217$5c8120b0$15836210$@crru.org.uk> We still have some remaining places available on the Cetacean Research & Rescue Unit?s 2018 ?Whales and dolphins of the Moray Firth? field project in Scotland (full details at: http://www.crru.org.uk/join_the_team.asp) Our 12 day field teams are run in the form of a formal training / educational programme, with structured lectures, seminars and presentations by the research team, practical training in field methodologies and data collection and analysis, and of course direct participation in the research, education and rescue work of this dynamic and outgoing conservation charity. The cost for a 12 day internship in 2018 is ?1150, and this will cover you for full board (all your accommodation and food costs), full equipment for boat work etc and ALL associated field costs during your stay with us in the picturesque heritage fishing village of Gardenstown, near Banff, in Aberdeenshire. You'll simply need to arrange your own travel itinerary to Banff, Scotland (nearest airport Dyce, Aberdeen, approx. 1? hours from the field base by coach) plus any personal spending money. For full details, please visit the CRRU project page at www.crru.org.uk/join_the_team.asp , or email us directly at info at crru.org.uk for further information and a pdf copy of the full Project Briefing and booking/application form. For a list of scientific publications and reports by the CRRU research team, see: www.crru.org.uk/publications.asp With all best wishes and thanks Dr. Kevin Robinson Director, CRRU kev.robinson at crru.org.uk Cetacean Research & Rescue Unit, PO Box 11307, Banff, AB45 3WB, Scotland, UK | ( +44 (0)1261 851696 | www.crru.org.uk Whale and Dolphin Research | Environmental Educational Outreach | Marine Wildlife Rescue | Consultancy | MMO Services Recognised Scottish Charity No. SC035473 P Please consider the environment before printing this e-mail -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image002.png Type: image/png Size: 728 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image004.png Type: image/png Size: 1057 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image006.png Type: image/png Size: 1532 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image008.png Type: image/png Size: 772 bytes Desc: not available URL: From dorian.houser at nmmpfoundation.org Sun Aug 12 16:11:05 2018 From: dorian.houser at nmmpfoundation.org (Dorian Houser) Date: Sun, 12 Aug 2018 16:11:05 -0700 Subject: [MARMAM] Release of ANSI standard - Procedure for Determining Audiograms in Toothed Whales through Evoked Potential Methods Message-ID: To the MARMAM community - This post announces that in June 2018 the American National Standards Institute (ANSI) published an ANSI standard entitled, "Procedure for Determining Audiograms in Toothed Whales through Evoked Potential Methods (ANSI/ASA S3/SC1.6-2018)." The new ANSI standard describes procedures for measuring auditory evoked potential (AEP) audiograms in odontocete cetaceans and provide recommendations in the areas of: ? General equipment requirements ? Stimulus waveforms for measuring hearing thresholds ? Acoustic stimulus waveform calibration ? Threshold estimation methods ? Results reporting formats ? Modulation rate transfer function determination ? Background noise considerations ? Testing arrangements, including types of electrodes and their placement. There are numerous variations in AEP methods used to test toothed whale hearing that result in variable threshold measurements across species (and even within the same individual). The purpose of ANSI/ASA S3/SC1.6-2018 is to standardize methods such that the results of AEP hearing tests are comparable across laboratories and researchers. Ultimately, this should facilitate the incorporation of AEP hearing data into environmental stewardship efforts related to ocean noise issues. The standard can be obtained from the Acoustical Society of America Standards Store (https://acousticalsociety.org/standards/). As a reminder for those of you that are members of the Acoustical Society of America, you are entitled to five free standards downloads per year. Sincerely, Dorian Houser -- Dorian S. Houser, Ph.D. Director of Biologic and Bioacoustic Research Interim Director of Environmental Stewardship National Marine Mammal Foundation 877-360-5527 ext.112 dorian.houser at nmmfoundation.org -------------- next part -------------- An HTML attachment was scrubbed... URL: From marauten at uni-potsdam.de Mon Aug 13 03:38:17 2018 From: marauten at uni-potsdam.de (Marijke Autenrieth) Date: Mon, 13 Aug 2018 12:38:17 +0200 Subject: [MARMAM] =?utf-8?q?New_Publication=3A_=E2=80=8BHigh-quality_whole?= =?utf-8?q?-genome_sequence_of_an_abundant_Holarctic_odontocete=2C_the_har?= =?utf-8?q?bour_porpoise_=28Phocoena_phocoena=29?= Message-ID: Dear Colleagues, my co-authors and I are pleased to announce that our paper, previously online at BioRxiv, is now available online on Molecular Ecology Resources: High-quality whole-genome sequence of an abundant Holarctic odontocete, the harbour porpoise (Phocoena phocoena) Marijke Autenrieth, Stefanie Hartmann, Ljerka Lah, Anna Roos, Alice Dennis, Ralph Tiedemann doi: https://doi.org/10.1111/1755-0998.12932 This Whole Genome Shotgun project has been deposited at DDBJ/ENA/GenBank under the accession PKGA00000000. The version described in this paper is version PKGA01000000. The draft annotation is deposited to Dryad (doi:10.5061/dryad.vr021gq). Abstract: The harbour porpoise (Phocoena phocoena) is a highly mobile cetacean found across the Northern hemisphere. It occurs in coastal waters and inhabits basins that vary broadly in salinity, temperature and food availability. These diverse habitats could drive subtle differentiation among populations, but examination of this would be best conducted with a robust reference genome. Here, we report the first harbour porpoise genome, assembled de novo from an individual originating in the Kattegat Sea (Sweden). The genome is one of the most complete cetacean genomes currently available, with a total size of 2.39 Gb and 50% of the total length found in just 34 scaffolds. Using 122 of the longest scaffolds, we were able to show high levels of synteny with the genome of the domestic cattle (Bos taurus). Our draft annotation comprises 22,154 predicted genes, which we further annotated through matches to the NCBI nucleotide database, GO categorization and motif prediction. Within the predicted genes, we have confirmed the presence of >20 genes or gene families that have been associated with adaptive evolution in other cetaceans. Overall, this genome assembly and draft annotation represent a crucial addition to the genomic resources currently available for the study of porpoises and Phocoenidae evolution, phylogeny and conservation. The paper is available online here: https://onlinelibrary.wiley.com/doi/abs/10.1111/1755-0998.12932 Kind regards, Marijke Autenrieth -- Marijke Autenrieth, M.Sc. PhD student phone: 0049-(0)-331-977-5586 mobile: 0049-176-81308823 email: marauten at uni-potsdam.de web: https://mammalsevolve.wordpress.com/ Universit?t Potsdam Evolutionsbiologie Karl-Liebknecht-Str. 24-25 14476 Golm -------------- next part -------------- An HTML attachment was scrubbed... URL: From immacoordinator at gmail.com Mon Aug 13 12:11:27 2018 From: immacoordinator at gmail.com (MMPATF IMMA) Date: Mon, 13 Aug 2018 20:11:27 +0100 Subject: [MARMAM] **First Call - Submissions of candidate IMMA areas of interest for the Extended Southern Ocean region** Message-ID: **First Call - Submissions of candidate IMMA areas of interest for the Extended Southern Ocean region** Dear Subscribers, This is to announce the first public call for submissions of Important Marine Mammal Area (IMMA) areas of interest in the Extended Southern Ocean region. The deadline for all submissions is by midnight Sunday September 23rd 2018. The IMMA is a global initiative developed by the IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force (IUCN MMPATF). The aim of IMMA classification is to identify and delineate discrete areas of habitat throughout the world's seas and oceans, important for one or more species of marine mammal, that have the potential to be delineated and managed for conservation. This will require the application of a standardized process for the collation and categorization of evidence, using a consistent protocol and agreed methodology. The Mediterranean Sea, Pacific Islands, and North East Indian Ocean & South East Asian Seas regions were assessed in 2016, 2017, and 2018. Results of these workshops can be accessed via the dedicated IMMA e-Atlas facility www.marinemammalhabitat.org/imma-eatlas The next region to be assessed by invited experts will be held in Brest, France, during October 2018, at a specially convened regional IMMA workshop for the Extended Southern Ocean region. To assist those participating experts to investigated where IMMAs may be located the IUCN MMPATF would like to invite interested parties to submit proposals using the IMMA standard web platform, which can be accessed through the following link - https://goo.gl/LQ3VFh - please be advised that you can only submit one proposal per survey taken. However, should you wish to submit more than one proposal, please complete this survey multiple times using the same link provided. All submissions will be collated and presented to participating experts at the Extended Southern Ocean regional IMMA workshop in October 2018. The IUCN MMPATF would like to thank you for your interest in the IMMA initiative. Further information about IMMAs can be found at the Task Force homepage (www.marinemammalhabitat.org) and on the Task Force IMMA Facebook page (tinyurl.com/zr9rvf4). For any further questions or assistance please contact the IUCN-MMPATF at immacoordinatorgmail.com Dr Michael J. Tetley - IMMA Coordinator IUCN Joint SSC/WCPA Marine Mammal Protected Areas Task Force -------------- next part -------------- An HTML attachment was scrubbed... URL: From abigailmachernis at gmail.com Mon Aug 13 13:13:07 2018 From: abigailmachernis at gmail.com (Abigail Machernis) Date: Mon, 13 Aug 2018 10:13:07 -1000 Subject: [MARMAM] New publication: A literature review examining the impacts of tourism on marine mammals Message-ID: Dear MARMAM colleagues, My co-authors and I are pleased to announce the publication of our literature review entitled, 'An updated literature review examining the impacts of tourism on marine mammals over the last fifteen years (2000-2015) to inform research and management programs.' *Abstract:* In 2000, Samuels et al. provided a comprehensive review of the scientific literature available at the time, which included 107 references related to the effects ?swim-with dolphin? tours have on animals? health and behavior. Over the last fifteen years, opportunities to view marine mammals in the wild have increased through commercial and private vessel-based platforms, in water ?swim-with? activities, and land-based observation stations. Additionally, ?structured? provisioning programs and illegal feeding interactions with a number of marine mammal species have increased. This current literature review updates and builds upon Samuels et al. 2000, by including almost 190 new references from 2000-2015 pertaining to swim-with activities, as well as vessel, land-based, and feeding interactions. The scope has also been expanded to include additional species of cetaceans, pinnipeds, and sirenians. Our updated review highlights the major animal responses to viewing activities in four major themes: (1) behavior, (2) habitat use, (3) health, and (4) reproduction. Reoccurring responses documented in all four interaction themes include changes in animals? behavioral budgets and ranging patterns, habitat displacement, avoidance behaviors, and reduced maternal care. Many studies highlighted the risks and effects associated with interactions, such as increased energetic demands, predation, acoustic disturbance, reduced juvenile survivorship, boat collision, and entanglement injuries. This updated literature review provides a comprehensive analysis of human-marine mammal interactions to date that can help guide future potential research projects and management strategies. *Citation*: Machernis, Abigail, J.R. Powell, L.K. Engleby, and T.R. Spradlin, 2018. An Updated Literature Review Examining the Impacts of Tourism on Marine Mammals over the Last Fifteen Years (2000-2015) to Inform Research and Management Programs. U.S. Dept. of Commerce, NOAA. NOAA Technical Memorandum NMFS-SER-7:66 p. The full article is available online at: https://repository. library.noaa.gov/view/noaa/18117 All the best, Abigail Machernis *Abigail Machernis *Master of Environmental Management, 2014 Coastal Environmental Management Nicholas School of the Environment | Duke University *abigail machernis at gmail.com * (908) 256-1626 -------------- next part -------------- An HTML attachment was scrubbed... URL: From Joshua.Smith at murdoch.edu.au Mon Aug 13 21:20:31 2018 From: Joshua.Smith at murdoch.edu.au (Joshua Smith) Date: Tue, 14 Aug 2018 04:20:31 +0000 Subject: [MARMAM] Call for submissions to Frontiers in Marine Science Special Issue 'Impacts of shipping on marine fauna' Message-ID: Dear MARMAM colleagues, On behalf of Jessica Redfern, Christine Erbe, David Peel and myself as Guest Editors of the Frontiers in Marine Science Special Issue 'Impacts of shipping on marine fauna', we invite you to submit your manuscripts for consideration within this Research Topic. Detailed information on the Research Topic and the peer review submission process can be found on the Frontiers website at https://www.frontiersin.org/research-topics/8654/impacts-of-shipping-on-marine-fauna. This Research Topic reflects the growing body of research working towards better understanding, quantifying, and managing shipping impacts on marine fauna and aims to cover a broad range of areas from ship strike and ship noise to eco--toxicological, biofouling and oil spill studies. All submissions are welcome and we invite you to distribute to your other colleagues and share widely. Abstract deadlines are at the end of September 2018 and submission of manuscripts end of January 2019. We look forward to receiving your submissions. Regards Joshua Smith (Guest Editor) Dr Joshua Smith Research Fellow, Murdoch University Josh Smith: Murdoch University Cetacean Research Unit Centre for Sustainable Aquatic Ecosystems Harry Butler Institute ORCID ID https://orcid.org/0000-0001-9912-422X -------------- next part -------------- An HTML attachment was scrubbed... URL: From jon.kurland at noaa.gov Tue Aug 14 16:30:31 2018 From: jon.kurland at noaa.gov (Jon Kurland - NOAA Federal) Date: Tue, 14 Aug 2018 15:30:31 -0800 Subject: [MARMAM] Protected Resources Job Opportunity Message-ID: NOAA Fisheries Alaska Region, Protected Resources Division, is advertising to fill a Marine Mammal Specialist position, ZP-401 band 2 (GS 7/9 equivalent) or band 3 (GS 11/12 equivalent). The division is responsible for the conservation and recovery of marine mammals including whales, fur seals, ice seals, harbor seals, and Steller sea lions. The position will be located either in Anchorage or Juneau. The person hired for this job will work in a team environment to conduct analyses and implement conservation actions to promote the management and recovery of protected species under the Endangered Species Act (ESA) and Marine Mammal Protection Act (MMPA). The job primarily involves conducting consultations with other federal agencies under section 7 of the ESA to assess and minimize impacts to listed species, with opportunities for engagement in other marine mammal conservation activities. We're looking for someone with excellent project management, analytical, writing, and verbal communication skills, and hopefully having experience with the MMPA and ESA. The announcements will be posted at www.usajobs.gov from August 15-28. Please encourage qualified people to apply. The job will be posted three ways: Recent Grad, #NMFS-AKR-2018-0018 (for applicants who completed a related degree within the past 2 years, or 6 years for veterans): https://www.usajobs.gov/GetJob/ViewDetails/507805700 MAP, #NMFS-AKR-2018-0019 (current or former federal civilian employees who hold or held non-temporary appointments in the competitive service): https://www.usajobs.gov/GetJob/ViewDetails/507809900 DE/CR, #NMFS-AKR-2018-0020 (all qualified US citizens or nationals): https://www.usajobs.gov/GetJob/ViewDetails/507810800 Anyone who has questions about the job should feel free to contact Aleria Jensen (aleria.jensen at noaa.gov, 907-586-7248) or me (jon.kurland at noaa.gov, 907-586-7638). Please forward this email to others who may be interested. Thanks! Jon Kurland Assistant Regional Administrator for Protected Resources NOAA Fisheries, Alaska Region -------------- next part -------------- An HTML attachment was scrubbed... URL: From rrolland at neaq.org Wed Aug 15 08:58:03 2018 From: rrolland at neaq.org (Rosalind Rolland) Date: Wed, 15 Aug 2018 15:58:03 +0000 Subject: [MARMAM] Senior Scientist Position-Marine Stress & Ocean Health Program Message-ID: Dear Colleagues, We seek a dynamic, creative and accomplished Senior Research Scientist with a proven fundraising and publication record in the broad realm of ocean health to lead the Marine Animal Stress and Ocean Health (MSOH) Program in the Anderson Cabot Center for Ocean Life (ACCOL) at the New England Aquarium (NEAq). The MSOH Program was founded in 1999, and conducts ground-breaking research on ocean health in marine wildlife. The program includes a dedicated laboratory for marine endocrinology including studies of stress, reproductive and metabolic hormones in marine mammals and sea turtles. The successful candidate would be conducting cutting edge ocean health work in a complementary field of study. We particularly seek a candidate with experience scaling his/her work to the population and/or ecosystem level with a conservation-driven focus. The senior scientist position is expected to integrate his/her own established research program into a successful ACCOL legacy program/laboratory in stress and reproductive endocrinology, health assessment and ocean health, and collaborate with other research/conservation efforts across the ACCOL/NEAq. While salary coverage is available for this position, ACCOL senior scientific staff members must develop/maintain independent, externally-funded, and internationally-recognized ocean conservation research programs, with specific fundraising targets. For a complete position description and to apply, go to: https://neaq.applicantpro.com/jobs/860562.html Rosalind M. Rolland DVM Senior Scientist & Director of Ocean Health Anderson Cabot Center for Ocean Life New England Aquarium Central Wharf Boston, MA 02110 617-973-6587 Research Faculty School for the Environment UMASS-Boston http://www.andersoncabotcenterforoceanlife.org/about-us/leadership/rosalind-rolland/ http://www.andersoncabotcenterforoceanlife.org/our-work/programs/marine-stress-ocean-health/ http://www.andersoncabotcenterforoceanlife.org/our-work/research/marine-stress/ [cid:image001.png at 01D4348F.379C39E0] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 34180 bytes Desc: image001.png URL: From frietsapriza at gmail.com Wed Aug 15 14:22:38 2018 From: frietsapriza at gmail.com (Federico Riet) Date: Wed, 15 Aug 2018 18:22:38 -0300 Subject: [MARMAM] 2-day Marine Mammal GIS course using ArcGIS @ 2018 SOLAMAC Meeting, Lima, Peru. Message-ID: Dear Colleagues I would like to announce a 2-day intensive (total of 18 hrs of training) GIS course will be held the 3rd and 4th of November prior to the start of the 2018 SOLAMAC Meeting in Lima, Peru. In this course you will learn how to make professional map using basic and more advance tools, such as Spatial Analysis, in ArcGIS. The course is based on exercises using marine mammal data and scenarios. The course will taught in Spanish and the number of participants are limited to maximum 17 people. This course is planned for people with limited or no GIS skills and/or people with some or no experience using ArcGIS. For more info about the course program, cost ,etc. please go to: http://solamac2018.com/ and click Workshops. Inquires or questions about the course please contact Federico Riet at: frietsapriza at gmail.com Regards, Federico -------------- next part -------------- An HTML attachment was scrubbed... URL: From gimenez.verdugo at gmail.com Tue Aug 14 03:11:11 2018 From: gimenez.verdugo at gmail.com (=?UTF-8?Q?Joan_Gim=C3=A9nez_Verdugo?=) Date: Tue, 14 Aug 2018 11:11:11 +0100 Subject: [MARMAM] New publication; Living apart together: Niche partitioning among Alboran Sea cetaceans Message-ID: Dear colleagues, I thought you might be interested in our recently published article in Ecological Indicators. Gim?nez, J., Ca?adas, A., Ram?rez, F., Af?n, I., Garc?a-Tiscar, S., Fern?ndez-Maldonado, C., Castillo, J.J. & de Stephanis, R. (2018). Living apart together: Niche partitioning among Alboran Sea cetaceans. *Ecological Indicators*, *95*, 32-40. Abstract Co-occurring species are expected to distribute themselves unevenly throughout ecological niche dimensions to avoid competitive exclusion. However, few studies have previously investigated spatial and trophic factors structuring an entire cetaceancommunity. Here, we combined density surface models (DSMs) with two dimension (*?*15N and *?*13C) isotopic niche spaces in order to identify the mechanistic processes underlying niche partitioning for the most abundant cetacean species inhabiting the Alboran Sea: the long-finned pilot whale (*Globicephala melas*), the Cuvier?s beaked whale (*Ziphius cavirostris*), the Risso?s dolphin (*Grampus griseus*), the bottlenose dolphin (*Tursi ops truncatus*), the striped dolphin ( *Stenella* coeruleoalba), and the short-beaked common dolphin (*Delphinus delphis*). DSMs provide a spatially-explicit assessment of species distribution through key spatial and environmental gradients, whereas isotopic niches characterize habitat and resource use. Our isotopic niche approach pointed to habitat and/or trophic segregation between the small (striped and short-beaked common dolphins) and large-sized cetacean species (Risso?s and bottlenose dolphins, and long-finned pilot whales). Conversely, DSMs suggested a larger degree of spatial segregation among species by depth, with some overlap for offshore species (long-finned pilot, Cuvier?s beaked whales and Risso?s dolphins) and also between bottlenose and common dolphins. Thus, both components of the ecological niche apparently played an important role in explaining niche partitioning among species, which, in turn, might explain the high abundance and diversity of cetaceans in the Alboran Sea. Further, when both methodologies were applied in isolation, the structure and functioning of this cetacean community was poorly resolved. The combination of both approaches is therefore desirable when investigating niche partitioning among ecologically similar species within communities. Direct publication link: https://www.sciencedirect.com/science/article/pii/S1470160X18305417 Research Gate link: https://www.researchgate.net/publication/326606200_Living_ apart_together_Niche_partitioning_among_Alboran_Sea_cetaceans Best wishes, Joan -- *Joan Gim?nez, PhD* Estaci?n Biol?gica de Do?ana (EBD-CSIC) Department of Conservation Biology Americo Vespucio Ave, s/n 41092 Sevilla (Spain) www.ebd.csic.es --- Personal website: http://gimenezverdugo.wixsite.com/joangimenez Research Gate: Joan Gim?nez Phone: +34 619 176 849 ? Please consider the environment before printing this E-mail -------------- next part -------------- An HTML attachment was scrubbed... URL: From p.tixier at deakin.edu.au Wed Aug 15 15:01:03 2018 From: p.tixier at deakin.edu.au (Paul Tixier) Date: Thu, 16 Aug 2018 08:01:03 +1000 Subject: [MARMAM] New publication: Killer whale interactions with blue-eye trevalla longline fisheries Message-ID: <1199f01d434e3$75cda920$6168fb60$@deakin.edu.au> Dear all, My co-authors and I are delighted to announce the publication of the article "Killer whale (Orcinus orca) interactions with blue-eye trevalla (Hyperoglyphe antarctica) longline fisheries" in PeerJ available at: https://peerj.com/articles/5306/ Citation: Tixier P, Lea M-A, Hindell MA, Guinet C, Gasco N, Duhamel G, Arnould JPY. (2018) Killer whale (Orcinus orca) interactions with blue-eye trevalla (Hyperoglyphe antarctica) longline fisheries. PeerJ 6:e5306 https://doi.org/10.7717/peerj.5306 Abstract: Over the past five decades, marine mammal interactions with fisheries have become a major human-wildlife conflict globally. The emergence of longline fishing is concomitant with the development of depredation-type interactions i.e., marine mammals feeding on fish caught on hooks. The killer whale (Orcinus orca) is one of the species most involved in depredation on longline fisheries. The issue was first reported in high latitudes but, with increasing expansion of this fishing method, other fisheries have begun to experience interactions. The present study investigated killer whale interactions with two geographically isolated blue-eye trevalla (Hyperoglyphe antarctica) fisheries operating in temperate waters off Amsterdam/St. Paul Islands (Indian Ocean) and south-eastern Australia. These two fisheries differ in the fishing technique used (vertical vs. demersal longlines), effort, catch, fleet size and fishing area size. Using 7-year (201016) long fishing and observation datasets, this study estimated the levels of killer whale interactions and examined the influence of spatio-temporal and operational variables on the probability of vessels to experience interactions. Killer whales interactions occurred during 58.4% and 21.2% of all fishing days, and over 94% and 47.4% of the fishing area for both fisheries, respectively. In south-eastern Australia, the probability of occurrence of killer whale interactions during fishing days varied seasonally with a decrease in spring, increased with the daily fishing effort and decreased with the distance travelled by the vessel between fishing days. In Amsterdam/St. Paul, this probability was only influenced by latitude, with an increase in the southern part of the area. Together, these findings document two previously unreported cases of high killer whale depredation, and provide insights on ways to avoid the issue. The study also emphasizes the need to further examine the local characteristics of fisheries and the ecology of local depredating killer whale populations in as important drivers of depredation. With kind regards Paul Paul Tixier, PhD Research Fellow ARC Linkage Project 2016 - 2020 "Developing global solutions to marine mammals - fisheries interactions" School of Life and Environmental Sciences, Faculty of Science Engineering & Built Environment Deakin University Melbourne Burwood Campus, 221 Burwood Highway, Burwood, VIC 3125 Tel: +61 (0)4 84 122 796 Email: p.tixier at deakin.edu.au Important Notice: The contents of this email are intended solely for the named addressee and are confidential; any unauthorised use, reproduction or storage of the contents is expressly prohibited. If you have received this email in error, please delete it and any attachments immediately and advise the sender by return email or telephone. Deakin University does not warrant that this email and any attachments are error or virus free. -------------- next part -------------- An HTML attachment was scrubbed... URL: From njaratiana.rabearisoa at ird.fr Tue Aug 14 06:10:09 2018 From: njaratiana.rabearisoa at ird.fr (Njaratiana Rabearisoa) Date: Tue, 14 Aug 2018 15:10:09 +0200 Subject: [MARMAM] New publication: Toothed whale and shark depredation indicators in the southwest Indian Ocean Message-ID: <75adf8b7-ebf1-7b0a-9d10-25e5bdddfe62@ird.fr> Dear all, We are pleased to announce the publication of the following article: Rabearisoa, N., Sabarros, P.S., Romanov, E.V., Lucas, V., Bach, P., 2018. Toothed whale and shark depredation indicators: A case study from the Reunion Island and Seychelles pelagic longline fisheries. PLOS ONE 13, e0202037. https://doi.org/10.1371/journal.pone.0202037 **Abstract** Depredation in marine ecosystems is defined as the damage or removal of fish or bait from fishing gear by predators. Depredation raises concerns about the conservation of species involved, fisheries yield and profitability, and reference points based on stock assessment of depredated species. Therefore, the development of accurate indicators to assess the impact of depredation is needed. Both the Reunion Island and the Seychelles archipelago pelagic longline fisheries targeting swordfish (Xiphias gladius) and tuna (Thunnus spp.) are affected by depredation from toothed whales and pelagic sharks. In this study, we used fishery data collected between 2004 and 2015 to propose depredation indicators and to assess depredation levels in both fisheries. For both fisheries, the interaction rate (depredation occurrence) was significantly higher for shark compared to toothed whale depredation. However, when depredation occurred, toothed whale depredation impact was significantly higher than shark depredation impact, with higher depredation per unit effort (number of fish depredated per 1000 hooks) and damage rate (proportion of fish depredated per depredated set). The gross depredation rate in the Seychelles was 18.3%. A slight increase of the gross depredation rate was observed for the Reunion Island longline fleet from 2011 (4.1% in 2007?2010 and 4.4% in 2011?2015). Economic losses due to depredation were estimated by using these indicators and published official statistics. A loss of 0.09 EUR/hook due to depredation was estimated for the Reunion Island longline fleet, and 0.86 EUR/hook for the Seychelles. These results suggest a southward decreasing toothed whale and shark depredation gradient in the southwest Indian Ocean. Seychelles depredation levels are among the highest observed in the world revealing this area as a ?hotspot? of interaction between pelagic longline fisheries and toothed whales. This study also highlights the need for a set of depredation indicators to allow for a global comparison of depredation rates among various fishing grounds worldwide. This is an open access publicationavailable from: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202037 Any request can be made to njaratiana.rabearisoa at ird.fr Cheers, Njaratiana -- Njaratiana RABEARISOA IRD UMR 248 MARBEC, Ob7 Station Ifremer Avenue Jean Monnet, CS 30171 34203 S?te cedex T?l : +33 (0)4 99 57 32 04 -------------- next part -------------- An HTML attachment was scrubbed... URL: From akkayaaylin at yahoo.com Fri Aug 17 00:47:34 2018 From: akkayaaylin at yahoo.com (aylin akkaya) Date: Fri, 17 Aug 2018 07:47:34 +0000 (UTC) Subject: [MARMAM] Autumn and Winter Volunteer and Intern Recruitment for the South Adriatic References: <1630653208.9586719.1534492054755.ref@mail.yahoo.com> Message-ID: <1630653208.9586719.1534492054755@mail.yahoo.com> VOLUNTEER AND INTERN RECRUITMENT FOR THE MONTENEGRO DOLPHIN PROJECT (SOUTH ADRIATIC SEA) OUR PROJECT The Montenegro Dolphin Project is a scientific project born from the partnership between the Marine Mammals Research Association (DMAD) and the Natural History Association of Montenegro. Our study is the first long term research study of marine mammals in Montenegrin coastal waters. We aim?to address questions about marine mammal abundance, distribution and behavior, define critical habitats and investigate the impact of major threats. Our wider attention focuses on the promotion and implementation of awareness initiatives targeted at the local community, particularly youth. WHO WE ARE LOOKING FOR We offer several volunteering and internship positions: this is an extremely valuable opportunity for graduates, that wish to gain experience in the marine mammal research field, and undergraduates, that would like to obtain internship academic credits.?It could be used to develop a scientific project for?BSc?and?MSc thesis.?However, we are also open to accept applications from anyone whose love for dolphins is strong and sincere. Opportunities are available starting from?September 2018?.?The minimum duration of the placements is?2 MONTHS, with possible exceptions for skilled candidates. REQUIREMENTS -True interest for marine conservation, self-motivation, maturity and ability to work responsibly;-Ability to cohabit in a dynamic and multicultural environment;-Respect for the organization's rules and willingness to follow standards and procedures;-Proven experience of working effectively as part of a team;-Fluent English (both spoken and written) and good communication skills;-High computer literacy and willingness to learn new software applications.Background in marine biology and previous fieldwork experience are an advantage. FIELD WORK AND RESPONSIBILITIES -Performing land-based surveys at least three times a week, including sunrise and sunset hours; -Performing boat-based surveys at least once a week: boat surveys can be long and often tiring, so you are expected to feel comfortable on board and prepared to handle motion sickness.-Collecting dolphins sighting and behavior data, as well as environmental and anthropogenic data;-Operating theodolite and managing its software Pythagoras;-Data entry and analysis;-Cataloging and matching individuals of target species for photo-ID studies via Discovery software;-Raising stakeholder awareness.-Promoting citizenscience activities TRAINING The Montenegro Dolphin Project team will provide lectures and field work training as well as constant mentoring.You will be given the chance to learn the most popular methodologies used in marine mammals research such as:-Theodolite operation and Pythagoras software;-Photo-ID and Discovery software;-Data entry and analysis;-ArcGIS mapping PROJECT PARTICIPATION FEE The positions are unpaid and require a contribution fee of?700 euros / month?which includes: -Accommodation and expenses-Transportation between the project sites within the country-Training and lectures-Scientific support-Field work-Use of the equipment Applicants are responsible for their transportation to/from Montenegro, meals, insurance (all participants should have health and/or travel insurance) and personal expenses. HOW TO APPLY Email your CV and cover letter to info at dmad.org.tr or akkayaaylinn at gmail.com (Aylin Akkaya Bas)?explaining why you are the perfect asset for our team and which goals you hope to achieve with us! Please mention the PERIOD OF INTEREST AND DURATION OF AVAILABILITY! If you wish to have more info about our work and get to know us better follow our websites: https://www.dmad.org.tr/volunteering All the best,Dr. Aylin Akkaya BasScientific Director of?Marine Mammals Research AssociationDeniz Memelileri Ara?t?rma Derne?i (DMAD) +38260024363skype: aylin.akkaya3info at dmad.org.trwww.dmad.org.tr -------------- next part -------------- An HTML attachment was scrubbed... URL: From brooke at brookebessesen.com Thu Aug 16 13:34:12 2018 From: brooke at brookebessesen.com (Brooke Bessesen) Date: Thu, 16 Aug 2018 13:34:12 -0700 Subject: [MARMAM] NEW BOOK: Vaquita: Science, Politics, and Crime in the Sea of Cortez Message-ID: <000001d435a0$7e50a1c0$7af1e540$@brookebessesen.com> Dear MARMAM friends, I'm pleased to share news of my upcoming book, Vaquita: Science, Politics, and Crime in the Sea of Cortez, due out next month from Island Press. This "heartfelt and alarming tale" (Publishers Weekly) attempts to untangle the intricate controversies behind the precipitous decline of the world's smallest cetacean. Early copies are available through the publisher's website with a 20% discount (CODE: 4VAQUITA) https://islandpress.org/books/vaquita. If anyone is teaching biology, ecology, conservation, political science, environmental law or other related coursework and would like to use Vaquita in the classroom, they can request an exam copy . All best, Brooke Bessesen Research Fellow Osa Conservation -------------- next part -------------- An HTML attachment was scrubbed... URL: From oliverhooker at prstatistics.com Fri Aug 17 11:00:22 2018 From: oliverhooker at prstatistics.com (Oliver Hooker) Date: Fri, 17 Aug 2018 19:00:22 +0100 Subject: [MARMAM] Intro course on Frequentist and Bayesian mixed (Hierarchical) models using R (IFBM01) In-Reply-To: References: Message-ID: General intro course on Frequentist and Bayesian mixed (Hierarchical) models using R (IFBM01) The applications of mixed models to analyse complicated datasets has increased a lot recently. Mixed models are particular useful for dealing with both lab data that containing multiple replicates and treartment but also field experiments where you have to consider temporal and spatial data making them very useful for people working with marine mammals. https://www.prstatistics.com/course/introduction-to-frequentist-and-bayesian-mixed-hierarchical-modelsiifbm01/ Final, few places available. This course will be delivered by Dr Andrew Parnell from the 8th - 12th October 2018 in Glasgow city centre using a varied range of examples from life-sciences Course Overview: This course will cover introductory mixed or hierarchical modelling (fixed and random effects models) for real-world data sets from both a Frequentist and Bayesian perspective. These methods lie at the forefront of statistics research and are a vital tool in the scientist?s toolbox. The course focuses on introducing concepts and demonstrating good practice in mixed modelling. All methods are demonstrated with data sets which participants can run themselves. Participants will be taught how to fit hierarchical models using both the standard lme4 mixed effects models library in R, together with the Bayesian modelling framework via rstanarm. The course covers the full gamut from simple regression models through to full generalised multivariate mixed structures. The relevant advantages and disadvantages of both the Frequentist and Bayesian approaches will be presented.. Participants are encouraged to bring their own data sets for discussion with the course tutors. Monday 8th ? Classes from 09:30 to 17:30 Basic concepts Class 1: Introduction; some example datasets; overview of course Class 2: Revision: probability distributions and likelihood Class 3: Maximum likelihood and bootstrap uncertainties Practical: revision on using R to load data, create plots and fit statistical models. Tuesday 9th ? Classes from 09:30 to 17:30 Intro to mixed models Class 1: Linear and generalised linear models (GLMs) Class 2: Simple mixed regression models Class 3: Generalised Linear Mixed Models (GLMMs) Practical: introduction to lme4 Wednesday 10th ? Classes from 09:00 to 17:00 Bayesian hierarchical models Class 1: Introduction to Bayesian inference Class 2: Bayesian computation and Markov chain Monte Carlo Class 3: Bayesian Hierarchical Models (BHMs) Practical: Introduction to rstanarm Thursday 11th ? Classes from 09:00 to 17:00 Extending mixed models Class 1: Multivariate and multi-layer hierarchical models Class 2: Shrinkage and variable selection Class 3: Non-Linear mixed models Friday 12th ? Classes from 09:30 to 16:00 Advanced topics and bring your own data Class 1: Extending Bayesian models Class 2: Using stan (instead of rstanarm) for richer inference Practical: analyse and get help with your data. Email oliverhooker at psstatistics.com Check out our sister sites, www.PRstatistics.com (Ecology and Life Sciences) www.PRinformatics.com (Bioinformatics and data science) www.PSstatsistics.com (Behaviour and cognition) 1. October 1st ? 5th TIME SERIES MODELS FOR ECOLOGISTS (TSME02) Glasgow, Dr Andrew Parnell https://www.prstatistics.com/course/time-series-models-foe-ecologists-tsme02/ 2. October 1st ? 5th 2018 INTRODUCTION TO LINUX WORKFLOWS FOR BIOLOGISTS (IBUL03) Glasgow, Scotland, Dr. Martin Jones https://www.prinformatics.com/course/introduction-to-linux-workflows-for-biologists-ibul03/ 3. October 8th ? 12th 2018 INTRODUCTION TO FREQUENTIST AND BAYESIAN MIXED (HIERARCHICAL) MODELS (IFBM01) Glasgow, Scotland, Dr Andrew Parnell https://www.psstatistics.com/course/introduction-to-frequentis-and-bayesian-mixed-models-ifbm01/ 4. October 15th ? 19th 2018 APPLIED BAYESIAN MODELLING FOR ECOLOGISTS AND EPIDEMIOLOGISTS (ABME04) Glasgow, Scotland, Dr. Matt Denwood, Emma Howard http://www.prstatistics.com/course/applied-bayesian-modelling-ecologists-epidemiologists-abme04/ 5. October 23rd ? 25th 2018 INTRODUCTIUON TO R (This is a private ?in-house? course) London, England, Dr William Hoppitt 6. October 29th ? November 2nd 2018 INTRODCUTION TO R AND STATISTICS FOR BIOLOGISTS (IRFB02) Glasgow, Scotland, Dr. Olivier Gauthier https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-biologists-irfb02/ 7. October 29th ? November 2nd 2018 INTRODUCTION TO BIOINFORMATICS FOR DNA AND RNA SEQUENCE ANALYSIS (IBDR01) Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw-genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/ 8. November 5th ? 8th 2018 PHYLOGENETIC COMPARATIVE METHODS FOR STUDYING DIVERSIFICATION AND PHENOTYPIC EVOLUTION (PCME01) Glasgow, Scotland, Dr. Antigoni Kaliontzopoulou https://www.prstatistics.com/course/phylogenetic-comparative-methods-for-studying-diversification-and-phenotypic-evolution-pcme01/ 9. November 19th ? 23rd 2018 STRUCTUAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (SEMR02) Glasgow, Scotland, Dr. Jonathan Lefcheck https://www.prstatistics.com/course/structural-equation-modelling-for-ecologists-and-evolutionary-biologists-semr02/ 10. November 26th ? 30th 2018 FUNCTIONAL ECOLOGY FROM ORGANISM TO ECOSYSTEM: THEORY AND COMPUTATION (FEER01) Glasgow, Scotland, Dr. Francesco de Bello, Dr. Lars G?tzenberger, Dr. Carlos Carmona http://www.prstatistics.com/course/functional-ecology-from-organism-to-ecosystem-theory-and-computation-feer01/ 11. December 3rd ? 7th 2018 INTRODUCTION TO BAYESIAN DATA ANALYSIS FOR SOCIAL AND BEHAVIOURAL SCIENCES USING R AND STAN (BDRS01) Glasgow, Dr. Mark Andrews https://www.psstatistics.com/course/introduction-to-bayesian-data-analysis-for-social-and-behavioural-sciences-using-r-and-stan-bdrs01/ 12. January 21st ? 25th 2019 STATISTICAL MODELLING OF TIME-TO-EVENT DATA USING SURVIVAL ANALYSIS: AN INTRODUCTION FOR ANIMAL BEHAVIOURISTS, ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (TTED01) Glasgow, Scotland, Dr. Will Hoppitt https://www.psstatistics.com/course/statistical-modelling-of-time-to-event-data-using-survival-analysis-tted01/ 13. January 21st ? 25th 2019 ADVANCING IN STATISTICAL MODELLING USING R (ADVR08) Glasgow, Scotland, Dr. Luc Bussiere, Dr. Tom Houslay http://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr08/ 14. January 28th? February 1st 2019 AQUATIC ACOUSTIC TELEMETRY DATA ANALYSIS AND SURVEY DESIGN Glasgow, Scotland, VEMCO staff and affiliates https://www.prstatistics.com/course/aquatic-acoustic-telemetry-data-analysis-atda01/ 15. 4th ? 8th February 2019 DESIGNING RELIABLE AND EFFICIENT EXPERIMENTS FOR SOCIAL SCIENCES (DRES01) Glasgow, Scotland, Dr. Daniel Lakens https://www.psstatistics.com/course/designing-reliable-and-effecient-experiments-for-social-sciences-dres01/ 16. February 11th ? 15th 2019 REPRODUCIBLE DATA SCIEDNCE FOR POPULATION GENETICS Glasgow, Scotland, Dr. Thibaut Jombart, Dr. Zhain Kamvar https://www.prstatistics.com/course/reproducible-data-science-for-population-genetics-rdpg02/ 17. 25th February ? 1st March 2019 MOVEMENT ECOLOGY (MOVE02) Margam Discovery Centre, Wales, Dr. Luca Borger, Prof. Ronny Wilson, Dr Jonathan Potts https://www.prstatistics.com/course/movement-ecology-move02/ 18. March 4th ? 8th 2019 BIOACUSTIC DATA ANALYSIS Glasgow, Scotland, Dr. Paul Howden-Leach https://www.prstatistics.com/course/bioacoustics-for-ecologists-hardware-survey-design-and-data-analysis-biac01/ 19. March 11th ? 15th 2019 ECOLOGICAL NICHE MODELLING USING R (ENMR03) Glasgow, Scotland, Dr. Neftali Sillero http://www.prstatistics.com/course/ecological-niche-modelling-using-r-enmr03/ 20. MARCH 18TH ? 22ND 2019 INRODUCTION TO R FOR BIOMEDICAL SCIENCES (IRBM01) Crete, Greece, Dr Aristides (Aris) Moustakas Link to follow soon 21. March 25th ? 29th 2019 LANDSCAPE GENETIC/GENOMIC DATA ANALYSIS USING R (LNDG03) Glasgow, Scotland, Prof. Rodney Dyer http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/ 22. A pril 1st ? 5th 2019 INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R (IPSY01) Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy02/ 23. April 8th ? 12th MACHINE LEARNING Glasgow Scotland, Dr Aristides (Aris) Moustakas https://www.prstatistics.com/course/machine-learning-using-r-mlur01/ -- Oliver Hooker PhD. PR statistics 2018 publications - Alternative routes to piscivory: Contrasting growth trajectories in brown trout (Salmo trutta) ecotypes exhibiting contrasting life history strategies. Ecology of Freshwater Fish. DOI to follow Phenotypic and resource use partitioning amongst sympatric lacustrine brown trout, Salmo trutta. Biological Journal of the Linnean Society. DOI 10.1093/biolinnean/bly032 prstatistics.com facebook.com/prstatistics/ twitter.com/PRstatistics groups.google.com/d/forum/pr-statistics-post-course-forum prstatistics.com/organiser/oliver-hooker/ 6 Hope Park Crescent Edinburgh EH8 9NA +44 (0) 7966500340 From siddiqui at hawaii.edu Fri Aug 17 03:51:17 2018 From: siddiqui at hawaii.edu (Sabena Siddiqui) Date: Fri, 17 Aug 2018 00:51:17 -1000 Subject: [MARMAM] Accepting Applications for ACS Student Leaders Message-ID: Dear MARMAM subscribers, The American Cetacean Society Student Coalition (ACSSC) is the student arm of the American Cetacean Society (ACS), the world's oldest whale conservation organization. After 50 years ACS continues to be a leader in the field of cetacean education, conservation, policy, and education ( http://acsonline.org/). The ACSSC is a community of future researchers, policy makers, conservationists, and enthusiasts committed to protecting the marine environment and the lives of cetaceans. Through direct action informed by science, ACS groups act as forums where students can learn more about cetaceans and their marine environment to carry out the most effective, research-based responses to the perils that cetaceans face. Student members of ACS are provided with an opportunity to feel inspired, engaged, and empowered through an active web of regional student groups across the country. The ACSSC serves as a much-needed bridge between the scientific community and the public. Our student groups use community education and citizen science to foster conservation and scientific literacy in their communities. The Coalition works to provide students of all skill sets with support and access to a community of other young professionals, experts in the field, and with the support of the American Cetacean Society. We invite all US university and college students (coastal or landlocked) to join our coalition by leading their own groups. One of the benefits of joining the ACS National Student Coalition is the ability to network and collaborate with your peers in different disciplines and institutions to address the challenges that cetaceans face today. Leading your own ACS student coalition group can be very rewarding and fun. ACSSC activities have included: citizen science projects, water quality testing, cetacean research, oyster reef restoration, beach clean ups, guest speakers, panel discussions, documentary screenings, lobbying, fundraisers, and many social events. ACSSC groups have implemented campaigns focusing upon issues such as sustainable seafood and its impacts upon cetaceans, marine debris and entanglement, local marine conservation issues, and more. For more information regarding what is involved in starting your own student group visit our website: https://www.acsonline.org/students. Scientists, supervisors, professors, etc., please refer your promising students to us! If you are interested in starting your own group, get in touch with us: ACSSC at acsonline.org Like us on facebook to see our latest updates and campaign activities: ACSSC facebook: https://www.facebook.com/American-Cetacean-Society-Student-Coalition -ACSSC-177540238954065/ *Sabena Siddiqui , **MSc student University of Hawaii* Student Chair, American Cetacean Society Board of Directors *"P**rotecting whales, dolphins, porpoises, and their habitats through public education, research grants, and conservation actions.*" ACS website ACS Student Coalition website -------------- next part -------------- An HTML attachment was scrubbed... URL: From PLopes at ispa.pt Thu Aug 16 11:36:15 2018 From: PLopes at ispa.pt (=?Windows-1252?Q?Patr=EDcia_Alexandra_Rachinas_Lopes?=) Date: Thu, 16 Aug 2018 18:36:15 +0000 Subject: [MARMAM] =?windows-1252?q?New_publication=3A_D-Track=8BA_semi-aut?= =?windows-1252?q?omatic_3D_video-tracking_technique_to_analyse_movements_?= =?windows-1252?q?and_routines_of_aquatic_animals_with_application_to_capt?= =?windows-1252?q?ive_dolphins?= Message-ID: An HTML attachment was scrubbed... URL: From mmoore at whoi.edu Sat Aug 18 03:33:39 2018 From: mmoore at whoi.edu (Michael Moore) Date: Sat, 18 Aug 2018 06:33:39 -0400 Subject: [MARMAM] TEDx Provincetown - Ropeless FIshing Message-ID: <54506d4f-0569-0ac2-2580-a7da9991683c@whoi.edu> This TEDx video shares a perspective on how to potentially avoid the North Atlantic right whale becoming the next Vaquita. Michael Moore https://www.youtube.com/watch?v=vhkY_Ny-sBA -------------- next part -------------- An HTML attachment was scrubbed... URL: From paulinegauffier at hotmail.fr Fri Aug 10 18:17:02 2018 From: paulinegauffier at hotmail.fr (Pauline Gauffier) Date: Sat, 11 Aug 2018 01:17:02 +0000 Subject: [MARMAM] New humpback whale sighting in the Spanish Mediterranean (Cartagena) Message-ID: Dear colleagues, I would like to draw your attention to the unusual sighting of a humpback whale in the Spanish Mediterranean, near Cabo Ti?oso, Cartagena (roughly 37?32N / 001?07W). This might be the first local sighting of this species, although sightings of humpback whales have occurred almost annually in the Mediterranean Sea for the last decade. The animal, which is believed to be a juvenile individual, was first spotted by the Monitoring Service of Cabo Ti?oso MPA on the 5th of August, extremely close to shore. It has then been observed daily in the same area during the following 3 days, until the 8th of August. The animal was observed very close to the cliffs and up to a few miles offshore, an area of submarine canyons, home to several cetacean species including deep divers. It was displaying very intense surface activity, both in the presence of recreational vessels and by itself (some videos were filmed from the shore). The whale watching company Cet?ceos y Navegaci?n was able to get decent pictures of the fluke and dorsal fin that can be seen on the company's Facebook page. https://m.facebook.com/cetaceosynavegacion/photos/pcb.10155472754761576/10155472754461576/?type=3&source=48 https://m.facebook.com/photo.php?fbid=10155472754556576&id=223242901575&set=pcb.10155472754761576&source=48 High resolution images have been submitted to the North Atlantic Humpback Whale Catalogue, and matching is currently in progress. Some observers reported a strong fish smell although no surface feeding was directly observed and there are numerous observations of the whale breaching continuously for several minutes. To my knowledge, the whale has not been seen again since it was last spotted on the 8th of August. I would be grateful if I could receive an update in case someone spots the animal somewhere else. Cheers, Pauline Gauffier Reserva Marina de Cabo de Palos-Islas Hormigas, Spain -------------- next part -------------- An HTML attachment was scrubbed... URL: From georgina.wildoceans at gmail.com Fri Aug 17 19:20:50 2018 From: georgina.wildoceans at gmail.com (Georgina L Gemmell) Date: Sat, 18 Aug 2018 06:20:50 +0400 Subject: [MARMAM] Updated - Killer Whales of the NIO Photo ID Catalogue v Aug 2018 Message-ID: Dear Marmammers, On behalf of the Northern Indian Ocean Killer Whale Alliance I would like to alert you to the updated version of the following document - "Killer Whales of the Northern Indian Ocean: A Catalogue of Photo Identified Individuals". Version August 2018. DOI: 10.13140/RG.2.2.25912.19205 ** The catalogue currently holds 72 identified animals sighted in the Northern hemisphere of the Indian Ocean and its adjacent seas. PDF Download link - http://niokillerwhales.wixsite.com/nio?/download-pdf-version Live On Screen Version - http://niokillerwhales.wixsite.com/n?/copy-of-view-on-screen To request access to high-resolution images, contribute sightings or to join the NIO Killer Whale Alliance, please contact myself at georgina.wildoceans at gmail.com. All the best Georgina -- *Georgina Gemmell* Lead Administrator, Orca Project Sri Lanka -------------- next part -------------- An HTML attachment was scrubbed... URL: From akkayaaylin at yahoo.com Mon Aug 20 04:55:54 2018 From: akkayaaylin at yahoo.com (aylin akkaya) Date: Mon, 20 Aug 2018 11:55:54 +0000 (UTC) Subject: [MARMAM] New paper on the Residency Pattern and Encounter Rates of Bottlenose dolphins in the Istanbul Strait References: <2036383449.10942138.1534766154400.ref@mail.yahoo.com> Message-ID: <2036383449.10942138.1534766154400@mail.yahoo.com> Dear MARMAM readers, We are happy to announce the publication of our recent paper on the residency patterns of bottlenose dolphins within the Istanbul Strait.? Akkaya Ba?, A., ?zt?rk, B., & Amaha ?zt?rk, A. (n.d.). Encounter rate, residency pattern and site fidelity of bottlenose dolphins (Tursiops truncatus) within the Istanbul Strait, Turkey. Journal of the Marine Biological Association of the United Kingdom, 1-8. doi:10.1017/S0025315418000577 The link for the publication is provided below; https://www.cambridge.org/core/journals/journal-of-the-marine-biological-association-of-the-united-kingdom/article/encounter-rate-residency-pattern-and-site-fidelity-of-bottlenose-dolphins-tursiops-truncatus-within-the-istanbul-strait-turkey/7BE9354246C86789C9A5E9B9E5BAC3A2 Abstract The Istanbul Strait is an important cetacean habitat that is intensely used by humans. Yet little is known about their spatial-temporal distribution. To understand the encounter rates and residency patterns of bottlenose dolphins, photo-identification data were collected between 2011 and 2016 in the Istanbul Strait. The study showed that bottlenose dolphins are a regular, year-round component of the strait. The encounter rate was estimated to be four groups (22 individuals) per 10 km. The adjacent waters of Marmara Sea and Black Sea, that host relatively less marine traffic, had the highest number of encounters in the area. Conversely, the middle sections had the lowest number of encounters but the highest marine vessel density. Further, the encounter rates dropped to zero in the fishing zones, where the number of purse seines reached up to 100 per day. Additionally, dolphins showed varying degrees of residency patterns, with multi-year re-sightings. Maximum re-sighting distance was up to 35 km, which is more than the total length of the strait. This movement pattern should be investigated as it might reveal possible migration between local populations. This study finds that the Istanbul Strait serves as a critical habitat for the regional bottlenose dolphin populations and they are likely to be a part of a resident local population with a home range extending the length of the strait. Dedicated surveys with inter-regional collaborations are needed to evaluate the home range and population status of this endangered species for their effective conservation in one of the busiest waterways of the world. -------------- next part -------------- An HTML attachment was scrubbed... URL: From Emmanuelle.Leroy at univ-brest.fr Sun Aug 19 19:47:09 2018 From: Emmanuelle.Leroy at univ-brest.fr (Emmanuelle Leroy) Date: Mon, 20 Aug 2018 04:47:09 +0200 Subject: [MARMAM] new publication: On the reliability of acoustic annotations and automatic detections of Antarctic blue whale calls under different acoustic conditions Message-ID: <20180820044709.Horde.0sio28e_rlGZCtz2leGUZQ1@webmailperso.univ-brest.fr> Dear all, We are pleased to announce the publication of the article "On the reliability of acoustic annotations and automatic detections of Antarctic blue whale calls under different acoustic conditions" in JASA, available at:?https://doi.org/10.1121/1.5049803 abstract:? Evaluation of the performance of computer-based algorithms to automatically detect mammalian vocalizations often relies on comparisons between detector outputs and a reference data set, generally obtained by manual annotation of acoustic recordings. To explore the reproducibility of these annotations, inter- and intra-analyst variability in manually annotated Antarctic blue whale (ABW) Z-calls are investigated by two analysts in acoustic data from two ocean basins representing different scenarios in terms of call abundance and background noise. Manual annotations exhibit strong inter- and intra analyst variability, with less than 50% agreement between analysts. This variability is mainly caused by the difficulty of reliably and reproducibly distinguishing single calls in an ABW chorus made of overlaying distant calls. Furthermore, the performance of two automated detectors, based on spectrogram correlation or subspace-detection strategy, is evaluated by comparing detector output to a ?conservative? manually annotated reference data set, which comprises only analysts? matching events. This study highlights the need for a standardized approach for human annotations and automatic detections, including a quantitative description of their performance, to improve the comparability of acoustic data, which is particularly relevant in the context of collaborative approaches in collecting and analyzing large passive acoustic data sets. Kind regards, Emmanuelle C. Leroy, Ph.D. email: emmanuelle.leroy at univ-brest.fr -------------- next part -------------- An HTML attachment was scrubbed... URL: From andrea.ravignani at gmail.com Tue Aug 21 01:29:53 2018 From: andrea.ravignani at gmail.com (Andrea Ravignani) Date: Tue, 21 Aug 2018 10:29:53 +0200 Subject: [MARMAM] New publication: Ontogeny of vocal rhythms in harbor seal pups: an exploratory study Message-ID: <1E6138B6-5BD7-44F2-BCED-E4A12E0EF993@gmail.com> Dear colleagues, Our paper on temporal patterns in the millisecond-second range in harbour seal pups? calls has just been published in Current Zoology. The paper uses a range of quantitative and visualisation methods to quantify rhythmic structure in calls over development. The article is Open Access and freely available here: https://doi.org/10.1093/cz/zoy055 . If you would like to obtain a PDF, do not hesitate to contact me at: andrea.ravignani at gmail.com . Kind regards, Andrea Ravignani, A., Kello, C.T., de Reus, K., Kotz, S.A., Dalla Bella, S., M?ndez-Ar?stegui, M., Rapado-Tamarit, B., Rubio-Garcia, A. and de Boer, B., 2018. Ontogeny of vocal rhythms in harbour seal pups: an exploratory study. Current Zoology. Abstract. Puppyhood is a very active social and vocal period in a harbor seal?s life Phoca vitulina. An important feature of vocalizations is their temporal and rhythmic structure, and understanding vocal timing and rhythms in harbor seals is critical to a cross-species hypothesis in evolutionary neuroscience that links vocal learning, rhythm perception, and synchronization. This study utilized analytical techniques that may best capture rhythmic structure in pup vocalizations with the goal of examining whether (1) harbor seal pups show rhythmic structure in their calls and (2) rhythms evolve over time. Calls of 3 wild-born seal pups were recorded daily over the course of 1?3?weeks; 3 temporal features were analyzed using 3 complementary techniques. We identified temporal and rhythmic structure in pup calls across different time windows. The calls of harbor seal pups exhibit some degree of temporal and rhythmic organization, which evolves over puppyhood and resembles that of other species? interactive communication. We suggest next steps for investigating call structure in harbor seal pups and propose comparative hypotheses to test in other pinniped species. Andrea Ravignani Research Dpt., Sealcentre Pieterburen AI-Lab, Vrije Universiteit Brussel ravignani.wordpress.com From camilo.saavedra.penas at gmail.com Tue Aug 21 03:52:38 2018 From: camilo.saavedra.penas at gmail.com (Camilo Saavedra Penas) Date: Tue, 21 Aug 2018 12:52:38 +0200 Subject: [MARMAM] New publication: Environmental status of the short-beaked common dolphin Message-ID: Dear All, We are pleased to announce a new publication in the Special Issue "Multidisciplinary integrated surveys" of the Journal "Progress in Oceanography" Title: "Assessing the environmental status of the short-beaked common dolphin (/Delphinus delphis/) in North-western Spanish waters using abundance trends and safe removal limits" By: Camilo Saavedra, Tim Gerrodette, Maite Louzao, Julio Valeiras, Salvador Garc?a, Santiago Cervi?o, Graham J.Pierce and M. Bego?a Santos The following link provides 50 days' free access to the paper: https://authors.elsevier.com/a/1XXhXI7ECcM1a Highlights Multidisciplinary surveys are shown to be useful platforms for monitoring cetaceans. A positive trend in regional abundance of common dolphins was detected. Safe bycatch limits have been calculated for common dolphins in the study region. The Good Environmental Status of the common dolphin has been evaluated. The abundance indicates a good status but the bycatch is difficult to interpret. Abstract Monitoring and assessment of the status of marine mammal populations is a requirement of the European Marine Strategy Framework Directive (MSFD). Due to the difficulty of collecting data in the marine environment and because many populations of these highly mobile species inhabit waters of several Member States, monitoring of marine mammals is particularly challenging. In the present work we have used a 10-year time-series of data collected from multidisciplinary research surveys to estimate common dolphin (/Delphinus delphis/) abundance and trends in continental shelf waters of the northwest Spanish sub-region. We argue that this approach provides a valuable addition to large-scale dedicated surveys, offering a shorter interval between surveys and hence offering the possibility to track abundance changes at a regional scale. Trends in the number of dolphins present in the study area over the last 10 years show a mean increase of about 9.6% per year, which results in an evaluation of Good Environmental Status for the species in the area using the abundance indicator adopted in the framework of the MSFD. Data obtained from dedicated dual-platform surveys have been used to correct the detection bias in our data collected using single-platforms (attraction toward the observation platform and animals missed on the track-line), to obtain absolute abundance estimates for calculating bycatch limits. The average abundance over the study period was 12,831 dolphins [CI 95%; 9025, 18,242] calculated with the conventional distance sampling methodology, 4747 [3307, 6816] corrected for attraction and missed animals on the track-line, and 22,510 [15,776, 32,120] corrected only for missed animals on the track-line. The estimated safe bycatch limit for this area calculated from these abundance values were 218 [153, 310], 81 [56, 115] and 383 [268, 546] per year, respectively. Comparing these figures with estimates based on different sources, the percentage of dolphins that die in this study area is higher than the maximum limit allowable under the OSPAR criteria for population mortality adopted as an indicator for the MSFD. Best regards, Camilo Saavedra, Ph.D. Instituto Espa?ol de Oceanograf?a http://www.ieo.es/ e-mail: camilo.saavedra at ieo.es -------------- next part -------------- An HTML attachment was scrubbed... URL: From errol.ronje at gmail.com Mon Aug 20 13:51:08 2018 From: errol.ronje at gmail.com (Errol Ronje) Date: Mon, 20 Aug 2018 15:51:08 -0500 Subject: [MARMAM] new publication - 1990 TX bottlenose dolphin UME Message-ID: Hi all, On behalf of my co-authors I would like to draw your attention to our pre-publication available here: https://www.eaglehill.us/SENAonline/sena-v17-n3-2018.shtml Ronje E.I., H.Whitehead, and K.D. Mullin. 2018. The 1990 Common Bottlenose Dolphin (*Tursiops truncatus*) Mass Die-Off in East Matagorda Bay, Texas: New Insight into a Cold Case. *Southeastern Naturalist*, 17(3):411-422. Abstract - On 20 January 1990, twenty-three *Tursiops truncatus* (Common Bottlenose Dolphin) carcasses were found scattered around the interior shoreline of East Matagorda Bay, TX. Few accounts exist to document the presence of live or dead Common Bottlenose Dolphins inside the boundaries of East Matagorda Bay before or after the die-off. We conducted a review of areal data for East Matagorda Bay and the original investigation of the January 1990 mass die-off. Information we examined included the history of natural and anthropogenic changes to the area, dolphin stranding records, small-boat visual surveys, and dolphin dorsal-fin photographic identification. Natural events preceding the discovery of the dolphin carcasses were likely factors in the mortalities; however, the timing of engineering projects that modified access points between the bay and the Gulf of Mexico may be an additional factor that contributed to the cause of this unusual mortality event. For publication inquiries please contact: errol.ronje at gmail.com -------------- next part -------------- An HTML attachment was scrubbed... URL: From perrtreer at savannahstate.edu Mon Aug 20 08:03:20 2018 From: perrtreer at savannahstate.edu (Perrtree, Robin) Date: Mon, 20 Aug 2018 15:03:20 +0000 Subject: [MARMAM] Spring 2019 Internship Opportunity in Savannah, Georgia Message-ID: Savannah State University Dolphin Sciences Laboratory (SSUDS lab) internships The SSUDS lab is located adjacent to the marsh on the campus of Savannah State University in coastal Georgia. The SSUDS lab, led by Dr. Tara Cox, studies spatial ecology and conservation biology of long-lived marine vertebrates, marine and coastal policy and management, and human interactions with marine mammals. Current projects include: Human-interaction behaviors (particularly begging), stock structure and abundance estimates, catalog matching to other study areas in the SE USA, contaminant loads and genetics of common bottlenose dolphins. The SSUDS Lab selects volunteer interns during three seasons each year: * Winter/Spring (positions January to May, applications due by October 1st); * Summer (positions May to August, applications due by March 1st); * Fall (positions August to December, applications due by June 1st). Interns will support graduate research on common bottlenose dolphins living in the local waterways. There may be additional opportunities to help other marine science graduate students with diverse fieldwork. The SSUDS lab is currently accepting applications for Winter/Spring 2019 interns. There are 2 positions available. Application deadline is October 1st. Dates: Jan 7 - May 31 (Start and end dates are flexible) Location: Savannah State University in Savannah, Georgia Time: Interns are expected to commit to ~30 hours per week, and time will be split between lab and field work. Dolphin surveys will be conducted 2 days per month, with additional surveys in May. Duties: Lab duties: photo-identification, data entry and double checking Field duties: assisting with small boat-based photo-identification surveys including sighting dolphins, recording data, photographing dorsal fins, and measuring environmental variables Stranding response: although strandings are rare and unpredictable, you may be asked to help with data collection and necropsies Class: Interns are welcome to sit in on the marine mammalogy course taught by Dr. Cox (if space is available). Please note that hours spent in class do not count towards lab hours. Extra Opportunities: Local Volunteer Opportunities: Previous interns have taken advantage of their spare time to get involved with our network of marine science researchers in Georgia 1) Other SSU Marine Science Program Labs (field and lab research on shrimp, flatfish, oyster restoration, marine chemistry, etc.) 2) Tybee Island Marine Science Center (environmental education) 3) Skidaway Institute of Oceanography 4) GA DNR Non-game Division (cetacean, manatee, and sea turtle research) Qualifications: * Minimum age of 18 years old * Currently or recently enrolled in a college-level program in marine biology, biology, zoology, or related field * Strong interest in marine mammals, the environment, and conservation * Computer proficiency, especially MS Office; MS Access and ArcGIS experience a plus * Excellent verbal communication skills, fluent in English * Enthusiastic and dedicated, with strong interpersonal skills and ability to maintain a professional appearance and demeanor * Strong sense of responsibility, work ethic, and attention to detail * Works well in a team environment as well as individually * Ability to work long days in the sun/heat/cold on a small boat To apply please submit the following via email with the subject "SSUDS Internship" to perrtreer at savannahstate.edu. All attached files must be named starting with your last name (e.g. Lastname-SSUDS_application_spring_2019.doc, Lastname-transcript). Please combine your application materials into 1-2 files. * A cover letter describing why you are interested in this position, how the experience will help you meet your long-term goals, and your dates of availability. * A resume (or curriculum vitae) describing your relevant training and experience. * Current academic transcripts (unofficial are sufficient). * Names and contact information for two references. International applicants will be considered, but it is the responsibility of the applicant to acquire necessary visas and documentation This position is unpaid, and interns are responsible for providing their own housing and transport to Savannah, GA. If accepted, we can provide contact information for possible shared housing opportunities with SSU students or other interns. This is a great opportunity to work with scientists and graduate students in the field and lab while gaining experience with photo-identification and boat-based marine mammal surveys. Savannah State University offers a Master of Science in Marine Sciences; thus, successful interns may have future opportunities for graduate study in the SSUDS lab. For more information about Marine Sciences at SSU please visit: https://www.savannahstate.edu/cost/mar-env-science/marine-science/index.shtml ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Robin Perrtree SSUDS Lab Manager Marine Sciences Technician Savannah State University Marine Science Research Center room 111 912-358-3301 (office) 941-323-2750 (cell) -------------- next part -------------- An HTML attachment was scrubbed... URL: From jschuh at mysticaquarium.org Tue Aug 21 07:47:00 2018 From: jschuh at mysticaquarium.org (Schuh, Janelle) Date: Tue, 21 Aug 2018 14:47:00 +0000 Subject: [MARMAM] Mystic Aquarium - Animal Rescue internship Message-ID: <77C37C886E7ADF429A0A8552F788A20602EC590CE6@EX2010.searesearch.local> All, Please see below for the Mystic Aquarium Animal Rescue Program Spring internship opportunity. Applications are due Sept 30. Thanks!! Animal Rescue Program Mystic Aquarium responds to reports of live and dead marine mammals and sea turtles along the shores of Connecticut, Rhode Island and Fishers Island, N.Y. A rehabilitation facility is operated for pinnipeds, and occasionally cetaceans and sea turtles. Interns should be working toward a degree in marine biology, veterinary medicine or a related field. Recent graduates seeking experience in these fields are accepted. There is a minimum requirement of 40 hours per week and it is a 12 week internship. Interns must be motivated and responsible and have computer experience, organizational and communication skills, and the ability to work well with others. Daily Duties Work with both live and dead pinnipeds, cetaceans and sea turtles. Work may be done under extremely adverse weather conditions. Assist in the collection of Level A data for the NOAA Fisheries Service Assist in rescue and salvage responses Participate in post-mortem work and necropsies Assist in care for animals undergoing rehabilitation Assist in weekly seal physicals Complete a project for the animal rescue program Recent Projects Composting: An Eco-Friendly and Cost Efficient Mortality Disposal Method by Melissa Wands Evaluating cortisol levels in harbor seal (Phoca vitulina) pups undergoing rehabilitation by Jackman Eschenroeder & Robyn Lee Cross-Seasonal Nutritional Study of Harbor Seal (Phoca vitulina) Pup Formula from 2009-2012 by Melinda Kilty Assessing Public Awareness and Interest in the Seal Rescue Clinic Display by Meghana Pendruthi Application information can be found at http://www.mysticaquarium.org/careers/internships/ Janelle Schuh Animal Rescue Program Manager 860.572.5955 x154 | Hotline x107 | Cell 860.514.7132 [MA_Web] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 16903 bytes Desc: image001.png URL: From jschuh at mysticaquarium.org Tue Aug 21 07:47:38 2018 From: jschuh at mysticaquarium.org (Schuh, Janelle) Date: Tue, 21 Aug 2018 14:47:38 +0000 Subject: [MARMAM] Mystic Aquarium - Animal Rescue Program fellowship Message-ID: <77C37C886E7ADF429A0A8552F788A20602EC590D08@EX2010.searesearch.local> All, Please see below for an exciting new opportunity within the Mystic Aquarium Animal Rescue Program. This posting is specific to a fellowship position which is more advanced than our internship role. Applications for the spring semester are due Sept 30. Thanks!! Mystic Aquarium Animal Rescue Program Fellowship Fellowship summary The Animal Rescue Program (ARP) Fellowship position is an expanded internship. The goal of the program is to provide college students or recent college graduates that are pursuing a career in veterinary medicine an opportunity to expand their animal skills by learning proper techniques for treating marine animals within a rehabilitation setting. The Animal Rescue Program is a department within Mystic Aquarium whose mission is to inspire people to care for and protect our ocean planet through conservation, education, and research. Application deadlines are as follows: Spring fellowship (Jan-May): September 30 Summer fellowship (May-Aug): January 31 Fall fellowship (Sept-Dec): May 31 Demonstrate excellent representation of the aquarium at all times through a positive, can-do attitude and teamwork focused work ethic. The ARP Fellow is responsible for the day-to-day operations and general organization of the Animal Rescue Clinic (ARC) with guidance from ARP staff. Responsibilities include, but are not limited to: diet preparation, cleaning and maintenance of ARP areas, record keeping, and providing medical treatments to animals with guidance from ARP staff and Aquarium veterinarians. Medical treatments may include restraint for procedures, tube feeding, intravenous blood samples, subcutaneous fluids, intramuscular injections, etc. The ARP Fellow will also provide training and guidance to ARP volunteers and interns, as requested. Minimum requirements Must be willing to consistently provide internal and external customer service above and beyond expectation. One of the following degree options is required: a degree from an AVMA-accredited Veterinary Technology program, current enrollment in an AVMA-accredited Veterinary Technology program, current undergraduate enrollment (3rd or 4th year) in a pre-veterinary track program, current enrollment (1st or 2nd year) in an AVMA-accredited Veterinary Medicine degree program, or a bachelor's degree with equivalent animal experience to above. Experience working in a veterinary clinic setting is strongly desired. Current valid driver's license required. Must be proficient in Microsoft Office. Must be able to work independently as well as part of a team, possess strong written and verbal communication skills, and have flexibility, a high attention to detail, strong organization and time management skills, a positive attitude and a willingness to learn. Candidate must be able to meet the physical demands of the position which include prolonged standing and kneeling, lifting objects, and working in outdoor conditions. Responsibilities and essential functions All fellowships are unpaid with a minimum 12-16 week commitment required. The position is scheduled five days per week for a minimum of 40 hours each week. Applicants must be willing to work a flexible schedule, as hours may include evenings, weekends, and holidays. Housing is not provided. To perform this fellowship position successfully, an individual must be able to execute each essential duty satisfactorily. The requirements listed below are representative of the knowledge, skill, and/or ability required. * Assist ARP and veterinary staff in obtaining clinical and research samples collected from stranded animals * Perform and/or assist ARP and veterinary staff with clinical procedures and injections, fluid therapy, collection of diagnostic samples, tube feeding, and wound care * Perform and/or assist in overall ARC operations including feeding and caring for rehabilitating animals, delivering medications and supplements, cleaning and maintaining animal units, maintaining quarantine protocols, and record keeping * Assist ARP and veterinary staff with gross necropsy procedures, when necessary * Provide mentorship to interns/volunteers who are working within the ARC * All fellows are responsible for working in a safe manner at all times * Every fellow must properly use, and keep in good order, all personal protective equipment (PPE) supplied to them as protection from recognized hazards * Every fellow must report any unsafe condition * Every fellow must have a working knowledge of all Facility wide, and Department specific, safety procedures that relate to their position, including, but not limited to: Emergency Evacuation, Lockdown Procedure, and Fire Extinguisher Use * Perform all other duties as assigned by supervisor Project requirement ARP fellows will be required to complete a project by the end of their term. This project will be focused on some aspect of veterinary medicine with guidance from ARP staff. The final product will be a 12 minute PowerPoint presentation provided to Aquarium staff/interns/volunteers based on the project selected. Please visit the below website to apply. http://www.mysticaquarium.org/careers/internships/#arcfellowship Janelle Schuh Animal Rescue Program Manager 860.572.5955 x154 | Hotline x107 | Cell 860.514.7132 [MA_Web] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 16903 bytes Desc: image001.png URL: From eknight at pewtrusts.org Tue Aug 21 11:18:41 2018 From: eknight at pewtrusts.org (Emily Knight) Date: Tue, 21 Aug 2018 18:18:41 +0000 Subject: [MARMAM] Marmam listserv submission: Link to webinar recording Message-ID: <2dea61068ab94f498e80a86b8b185711@pewtrusts.org> Now Available: Webinar Recording on Examining Relationships between Northern Fur Seals, Pollock, and Climate Change in Alaska On Wednesday, July 25, 2018, the Lenfest Ocean Program hosted a webinar that featured Dr. Jeremy Sterling (Alaska Fisheries Science Center) and colleagues discussing their project to develop a new spatially explicit bioenergetics model to estimate the dietary needs of northern fur seals, and link the model to the existing climate-to-fish model of the Bering Sea (FEAST) and the multi-species stock assessment model (CEATTLE). You can access the webinar recording here. Please forward the link to anyone that might be interested. Also, let me know if you'd like a pdf of the PPT. Please feel free to reach out to me - Emily Knight, eknight at pewtrusts.org - if you have any questions. Best, Emily Emily Knight Manager, Lenfest Ocean Program [LenfestOceanProgram-Logo-Color-(2)] 901 E Street NW, 10th Floor Washington, DC 20004 SIGN UP FOR LENFEST OCEAN NEWS w: 202-540-6389 | c: 202-384-6534 | e: eknight at pewtrusts.org www.lenfestocean.org|twitter: @lenfestocean -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 9934 bytes Desc: image001.png URL: From Krista.Hupman at niwa.co.nz Tue Aug 21 17:36:23 2018 From: Krista.Hupman at niwa.co.nz (Krista Hupman) Date: Wed, 22 Aug 2018 00:36:23 +0000 Subject: [MARMAM] Leopard seal volunteer position New Zealand Message-ID: <6cfb66d3bcf94be09923bec9ba78c0ee@welwex02.niwa.local> Leopard seal volunteer position New Zealand A volunteer is required to assist with an ongoing study investigating the site fidelity and movement of leopard seals around New Zealand. This work involves desktop research including data entry and photo-identification of leopard seals. This project is part of the ongoing research for the Marine Megafauna Group at the National Institute of Water and Atmospheric Research, Wellington and in collaboration with LeopardSeals.Org. DATES: September 2018 ? April 2019. A minimum commitment of three months is required and priority will be given to those who can commit for longer periods. LOCATION: Wellington, New Zealand As this is a volunteer position, there is unfortunately no monetary compensation or living provisions. The successful candidate should arrange their own accommodation in Wellington, living expenses, travel costs and visa. QUALIFICATIONS: . The project is well suited to upper level undergrads, recent graduates and graduate students who have some background in biology, marine biology, ecology, zoology or related fields . Computer proficiency in MS Office (especially Excel) is a requirement. Additionally, proficiency in photo manipulation software (such as photoshop) would be an asset. APPLICATION PROCESS: . Email your CV to krista.hupman at niwa.co.nz . Outline of why you would like to work on this project, the dates when you are available to assist on the project, your qualifications and relevant experience. Kind regards, Dr Krista Hupman Marine Mammal Biologist/Ecologist Krista.hupman at niwa.co.nz T +64-4-386-0527 301 Evans Bay Parade, Greta Point, Wellington [cid:imagea9acf1.PNG at 50f00a8c.4c9a44c0] Dr Krista Hupman Cetacean Biologist/Ecologist T +64-4-386-0527 301 Evans Bay Parade, Greta Point, Wellington Connect with NIWA: niwa.co.nz Facebook Twitter LinkedIn Instagram To ensure compliance with legal requirements and to maintain cyber security standards, NIWA's IT systems are subject to ongoing monitoring, activity logging and auditing. This monitoring and auditing service may be provided by third parties. Such third parties can access information transmitted to, processed by and stored on NIWA's IT systems. -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: imagea9acf1.PNG Type: image/png Size: 12288 bytes Desc: imagea9acf1.PNG URL: From sophie.brasseur at wur.nl Wed Aug 22 04:51:12 2018 From: sophie.brasseur at wur.nl (Brasseur, Sophie) Date: Wed, 22 Aug 2018 11:51:12 +0000 Subject: [MARMAM] =?utf-8?q?Vacancy_PhD_Student_=E2=80=9CIndividual-based_?= =?utf-8?q?modelling_to_study_the_effect_of_retreating_sea_ice_on_arctic_s?= =?utf-8?b?ZWFsc+KAnQ==?= Message-ID: <871b210794db4a3a86f79ab0661eba2c@scomp5296.wurnet.nl> Vacancy PhD Student ?Individual-based modelling to study the effect of retreating sea ice on arctic seals? We are looking for an excellent, highly motivated PhD student with a keen interest in quantitative ecology and seals. The PhD student will be working in a multidisciplinary research project at the NIOZ department of Coastal Systems, Department of Aquatic Ecology and Water Quality Management (AEW, Wageningen University), the Arctic centre (University of Groningen), and Wageningen Marine Research (WMR, Wageningen University). LOCATION: ROYAL NIOZ TEXEL (THE NETHERLANDS) VACANCY ID: 2018-059 CLOSING DATE: SEPTEMBER 24TH, 2018 Please check out the full text on the website and reply via the link at the bottom of the web page (?APPLY TO THE JOB HERE?): https://www.workingatnioz.com/our-jobs/phd-student-?individual-based-modelling-to-study-the-effect-of-retreating-sea-ice-on-arctic-seals?.html on behalf of the team, Dr. Sophie M.J.M. Brasseur sophie.brasseur at wur.nl -------------- next part -------------- An HTML attachment was scrubbed... URL: From sophie.brasseur at wur.nl Wed Aug 22 03:02:14 2018 From: sophie.brasseur at wur.nl (Brasseur, Sophie) Date: Wed, 22 Aug 2018 10:02:14 +0000 Subject: [MARMAM] publication on Brucella pinnipedialis in seals in the Netherlands Message-ID: <5da960568af9425d920efb3f3a3a0d4f@scomp5296.wurnet.nl> We are pleased to announce our recent publication: BRUCELLA PINNIPEDIALIS IN GREY SEALS (HALICHOERUS GRYPUS) AND HARBOR SEALS (PHOCA VITULINA) IN THE NETHERLANDS Authors: Michiel V. Kroese, Lisa Beckers, Yvette J. W. M. Bisselink, Sophie Brasseur, Peter W. van Tulden, Miriam G. J. Koene, Hendrik I. J. Roest, Robin C. Ruuls, Jantien A. Backer, Jooske IJzer, Joke W. B. van der Giessen, and Peter T. J. Willemsen Journal of Wildlife Diseases, 54(3):439-449. Published By: Wildlife Disease Association https://doi.org/10.7589/2017-05-097 URL: http://www.bioone.org/doi/full/10.7589/2017-05-097 Abstract Brucellosis is a zoonotic disease with terrestrial or marine wildlife animals as potential reservoirs for the disease in livestock and human populations. The primary aim of this study was to assess the presence of Brucella pinnipedialis in marine mammals living along the Dutch coast and to observe a possible correlation between the presence of B. pinnipedialis and accompanying pathology found in infected animals. The overall prevalence of Brucella spp. antibodies in sera from healthy wild grey seals (Halichoerus grypus; n=11) and harbor seals (Phoca vitulina; n=40), collected between 2007 and 2013 ranged from 25% to 43%. Additionally, tissue samples of harbor seals collected along the Dutch shores between 2009 and 2012, were tested for the presence of Brucella spp. In total, 77% (30/39) seals were found to be positive for Brucella by IS711 real-time PCR in one or more tissue samples, including pulmonary nematodes. Viable Brucella was cultured from 40% (12/30) real-time PCR-positive seals, and was isolated from liver, lung, pulmonary lymph node, pulmonary nematode, or spleen, but not from any PCR-negative seals. Tissue samples from lung and pulmonary lymph nodes were the main source of viable Brucella bacteria. All isolates were typed as B. pinnipedialis by multiple-locus variable number of tandem repeats analysis-16 clustering and matrix-assisted laser desorption ionization-time of flight mass spectrometry, and of sequence type ST25 by multilocus sequence typing analysis. No correlation was observed between Brucella infection and pathology. This report displays the isolation and identification of B. pinnipedialis in marine mammals in the Dutch part of the Atlantic Ocean. Key words: Brucella pinnipedialis, Halichoerus grypus, MALDI-TOF MS, marine mammals, MLST, MLVA-16, Phoca vitulina, the Netherlands. Best regards, Sophie Dr. Sophie M.J.M. Brasseur Marine Mammalogist tel. +31 317 487072 home +31 6 215 677 41 sophie.brasseur at wur.nl -------------- next part -------------- An HTML attachment was scrubbed... URL: From cnau at mote.org Wed Aug 22 10:56:13 2018 From: cnau at mote.org (Christina Nau) Date: Wed, 22 Aug 2018 13:56:13 -0400 Subject: [MARMAM] Mote Marine Laboratory, Manatee Research Program Internship Message-ID: <0ab34bb4-351d-b24c-c0eb-5d746f757b51@mote.org> *Mote Marine Laboratory* *Manatee Research Program Internships* **** *Program Description* The Manatee Research Program studiesseveral aspects of the biology of manatees inhabiting the waters of southwestern Florida, including population dynamics, population genetics, habitat use, distributional patterns and social behavior. Winter field data and samples are collected using photo-identification and non-invasive genetic sampling with some habitat sampling. Field work during the winter season is conducted primarily in Charlotte Harbor and the Ft. Myers area and is both land and boat based. The long-term database of the program contributes to management and conservation measurements for Florida manatees. Additionally, the program collaborates with manatee researchers throughout the state of Florida and the Caribbean.For more information about, please visit: https://mote.org/research/program/manatee-research. *WE ARE CURRENTLY SEEKING INTERNS TO BEGIN IN JANUARY 2019, WITH APPLICATIONS DUE BY SEPTEMBER 30^th * ** *Internship Description* Internships are available during all four seasons and must be a MINIMUM of 12 weeks.Hours are typically Monday-Friday, 9am-5pm, although some longer days may be required for field work (especially during the winter season). Interns should expect to spend about 20% of their time in the field and about 80% of their time in the office/lab.Field work duties include assisting with data collection (which consists of photographing manatees, as well as recording behavioral observations and environmental conditions), boat handling, and equipment use and maintenance. Field work requires spending long hours in the field, sometimes in uncomfortable weather conditions. Office/Lab duties include data entry and database maintenance, image downloading and processing, matching images to known animals, creating representative sketches from images for searching, equipment maintenance, as well as miscellaneous tasks and errands. There is no financial compensation for these internship positions, and successful applicants will be responsible for their own living and transportation expenses. Shared housing opportunities near Mote Marine Laboratory may be available. A few scholarships may be available from Mote Marine Laboratory through a competitive application process (US citizens only). *Required Qualifications* * Minimum of 18 years of age and engaged in or recently completed undergraduate studies * A background or degree in Biology, Marine Biology, Ecology, Zoology, or a related field is preferred * Basic computer proficiency in Microsoft Office (especially Excel and Access); previous experience using ArcMap GIS is a plus but not required * Excellent communication skills; fluent in English * Must be physically able to stand for long periods of time and lift heavy objects * Knowledge of photography/SLR camera use and/or drawing skills are a plus * Desire and willingness to acquire knowledge and skills related to marine mammal field work and capable of working well as a team * * *To apply for a Manatee Research Program internship:* * Fill out an application form at Mote Marine Laboratory?s website (https://mote.org/research/internships/college-internship-program-overview) and be sure to select ?Manatee Research Program? as your first choice * Complete and provide to Mote?s intern office all other application materials including: a statement of interest, current college transcript, letter of recommendation, and /curriculum vitae /(incomplete applications will not be considered) Applicants may contact the Manatee Research Program?s intern coordinator, Christina Nau, (cnau at mote.org ) with questions regarding the internship. -- Christina Nau Manatee Research Program Mote Marine Laboratory 1600 Ken Thompson Parkway Sarasota FL 34236 Phone: (941) 388-4441 ext. 471 cnau at mote.org -------------- next part -------------- An HTML attachment was scrubbed... URL: From kacevedow at gmail.com Wed Aug 22 13:09:25 2018 From: kacevedow at gmail.com (Karina Acevedo) Date: Wed, 22 Aug 2018 15:09:25 -0500 Subject: [MARMAM] 4-year PhD studentship - Epigenetics of genital transformation of California sea lions Message-ID: Dear Marmam colleagues, There is an opportunity for a *fully funded 4-year PhD studentship* at the Immune Plasticity and Molecular Ecoepidemiology lab ( https://www.kacevedowhitehouselab.org/main), within the Biological Sciences Doctoral Program of the Autonomous University of Queretaro, Mexico ( http://fcn.uaq.mx/index.php/programas/posgrados/dcb/convocatoria-dcb) starting January 2019. The PhD project will focus on the *epigenetic basis of epithelial transformation of the genital tract of the California sea lion*. The project will be carried out in collaboration with The Marine Mammal Center, in California. The successful candidate must have a background in biological sciences (BSc and MSc in Biology or Veterinary Medicine) and be fluent in Spanish. There is no need to have worked with sea lions, but it would be helpful to have some experience in a molecular biology lab. Interested candidates should send a CV and letter of interest to Dr. Karina Acevedo-Whitehouse at karina.acevedo.whitehouse at uaq.mx before September 15th. ----------------------- Think of all the men who never knew the answers. Think of all those who never even cared. Still, there are some who ask why, who want to know, who dare to try. Rod Mckuen (Here he comes again) -------------- next part -------------- An HTML attachment was scrubbed... URL: From Virginia.Andrews-Goff at aad.gov.au Wed Aug 22 16:16:43 2018 From: Virginia.Andrews-Goff at aad.gov.au (Virginia Andrews-Goff) Date: Wed, 22 Aug 2018 23:16:43 +0000 Subject: [MARMAM] New publication: Humpback whale migrations to Antarctic summer foraging grounds through the southwest Pacific Ocean [SEC=UNCLASSIFIED] Message-ID: <1534979803181.98386@aad.gov.au> Please find below information about our new Scientific Reports publication, Humpback whale migrations to Antarctic summer foraging grounds through the southwest Pacific Ocean?, DOI: 10.1038/s41598-018-30748-4. Many thanks, Virginia Andrews-Goff, V., Bestley, S., Gales, N. J., Laverick, S. M., Paton, D., Polanowski, A. M., Schmitt, N. T. and Double, M. C. 2018. Humpback whale migrations to Antarctic summer foraging grounds through the southwest Pacific Ocean. Scientific Reports 8(1): 12333. Humpback whale (Megaptera novaeangliae) populations typically undertake seasonal migrations, spending winters in low latitude breeding grounds and summers foraging in high latitude feeding grounds. Until recently, a broad scale understanding of whale movement has been derived from whaling records, Discovery marks, photo identification and genetic analyses. However, with advances in satellite tagging technology and concurrent development of analytical methodologies we can now detail finer scale humpback whale movement, infer behavioural context and examine how these animals interact with their physical environment. Here we describe the temporal and spatial characteristics of migration along the east Australian seaboard and into the Southern Ocean by 30 humpback whales satellite tagged over three consecutive austral summers. We characterise the putative Antarctic feeding grounds and identify supplemental foraging within temperate, migratory corridors. We demonstrate that Antarctic foraging habitat is associated with the marginal ice zone, with key predictors of inferred foraging behaviour including distance from the ice edge, ice melt rate and variability in ice concentration two months prior to arrival. We discuss the highly variable ice season within the putative foraging habitat and the implications that this and other environmental factors may have on the continued strong recovery of this humpback whale population. Dr. Virginia Andrews-Goff Marine Mammal Research and Support Officer Australian Marine Mammal Centre Australian Antarctic Division 203 Channel Hwy, Kingston, TAS 7050 T: 03 6232 3122 | M: 0404 668 639 ___________________________________________________________________________ Australian Antarctic Division - Commonwealth of Australia IMPORTANT: This transmission is intended for the addressee only. If you are not the intended recipient, you are notified that use or dissemination of this communication is strictly prohibited by Commonwealth law. If you have received this transmission in error, please notify the sender immediately by e-mail or by telephoning +61 3 6232 3209 and DELETE the message. Visit our web site at http://www.antarctica.gov.au/ ___________________________________________________________________________ -------------- next part -------------- An HTML attachment was scrubbed... URL: From simon.elwen at gmail.com Thu Aug 23 02:36:21 2018 From: simon.elwen at gmail.com (Simon Elwen) Date: Thu, 23 Aug 2018 11:36:21 +0200 Subject: [MARMAM] African Bioacoustics Community conference. Last chance to submit an abstracts before 24 August. Message-ID: Due to high demand, we have had to extend the abstract submission deadline to allow for last minute applications. Final deadline is now 24 August 2018. This cross-cutting conference is the first of it's kind in Africa and will promote BIOACOUSTIC research currently taking place on the African continent, highlight areas for development, and provide a forum to explore future collaboration among African and International researchers. Please see website and facebook pages for full conference details: https://africanbioacoustic.wixsite.com/abcommunity https://www.facebook.com/africanbioacousticscommunity/ Of special interest to Marine Mammal researchers are PLENARY SPEAKERS: Prof Christine Erbe - The Marine Soundscape and The Effects of Noise on Marine Life Dr Sal Cerchio - The age of discovery in the 21st Century: Using passive acoustics to discover whale populations off the coasts of Africa Prof. Paul Cowley Prof. Paul Cowley - Trials, tribulations, successes and opportunities of establishing a national network of acoustic receivers Dr. Isabelle Charrier - Recognition Systems and Social Structures in Pinnipeds and SPECIAL EVENTS: 1) Panel discussion evening: Underwater Noise and Marine Life - Impacts, Policy, Where to next? 2) Science Communication Networking Event: Communicating about Communication (and other bioacoustic research) - mingling researchers with media and film makers 3) Workshop: Ecoacoustics in a nutshell (1 day) - by Prof. J?r?me Sueur We look forward to seeing you in Cape Town, South Africa this December. -------------- next part -------------- An HTML attachment was scrubbed... URL: From emm265 at cornell.edu Thu Aug 23 05:20:01 2018 From: emm265 at cornell.edu (Elizabeth McDonald) Date: Thu, 23 Aug 2018 08:20:01 -0400 Subject: [MARMAM] Job Announcement -- Bioacoustics of Fish and Marine Mammals Message-ID: On behalf of Dr. Helen Bailey, please see below for an employment opportunity. The University of Maryland Center for Environmental Science (UMCES), Chesapeake Biological Laboratory (CBL), is accepting applications for a Faculty Research Assistant to assist with a bioacoustics project to study the response of black sea bass to sounds, including dolphin calls and ship noise. Duties will include preparation of acoustic equipment and set-up of experiments, playbacks of dolphin calls and other sounds, and processing and analysis of calibrated noise measurements. Applicants should have experience with sound measurements, sound analysis software, and statistical software packages, such as R. Experience with fish bioacoustics is also desirable. Minimum requirement is a M.S. degree or B.S. degree with more than 2 years research experience related to bioacoustics, must be a U.S. citizen and able to pass a background check. For more details about the position, please contact Dr. Helen Bailey (hbailey at umces.edu). Application information is available at: https://umces.peopleadmin.com/postings/1172 -------------- next part -------------- An HTML attachment was scrubbed... URL: From kdudzinski at dolphincommunicationproject.org Wed Aug 22 05:49:56 2018 From: kdudzinski at dolphincommunicationproject.org (Kathleen M. Dudzinski) Date: Wed, 22 Aug 2018 08:49:56 -0400 Subject: [MARMAM] Reminder - Tribute to Dr. Jeanette Thomas Message-ID: <8CE2A139-7413-44DB-81D3-B0D7FD861628@dolphincommunicationproject.org> Dear Colleagues, Last month, I posted to MARMAM requesting contributions to a planned tribute to Dr. Jeanette Thomas, our colleague who died suddenly in early July. I write now as a final reminder to those of you who might still want to send a few thoughts or memories of Jeanette to be included in the Tribute. If so, please send your tributes to the journal by email > Our deadline for inclusion of your memories is 27 August 2018. Aquatic Mammals journal will include this Tribute to Jeanette in our next issue (44.5, to be published online on September 15, 2018). We will celebrate Jeanette?s vibrant attitude toward life and her significant contributions to our field of study and also to our lives. Thank you. Best Kathleen Kathleen M. Dudzinski, Ph.D. Editor, Aquatic Mammals Journal aquaticmammals at gmail.com www.aquaticmammalsjournal.org -------------- next part -------------- An HTML attachment was scrubbed... URL: From ewan_wakefield at yahoo.co.uk Wed Aug 22 04:41:36 2018 From: ewan_wakefield at yahoo.co.uk (Ewan Wakefield) Date: Wed, 22 Aug 2018 11:41:36 +0000 (UTC) Subject: [MARMAM] Dead cetacean ID, mid-Atlantic In-Reply-To: <495479440.9535697.1534169470152@mail.yahoo.com> References: <495479440.9535697.1534169470152.ref@mail.yahoo.com> <495479440.9535697.1534169470152@mail.yahoo.com> Message-ID: <1780093599.1232126.1534938097084@mail.yahoo.com> Dear All, Last month, while crossing the North Atlantic on a cruise ship, I encountered a dead cetacean at?49.130 N,?33.4363 W (i.e. in deep water, approximately 200 nm W of the Mid-Atlantic ridge and 600 nm NNW of the Azores).? Photographs of the animal can be downloaded from here: https://www.dropbox.com/sh/4nxqz6kqczpiygr/AADvcB9azpslvNIoI-d_5h93a?dl=0 The total body length was was approximately 4-7 m. The length and shape of the pectoral fin, as well as the shape of the melon and mouth line, suggest to me either a pilot whale or a Risso's dolphin. I would appreciate any further opinions on the animal'a identity. Thank you for your time, Ewan -------------------------------------------------------------------------------------------------- Dr Ewan Wakefield Email: Ewan_Wakefield at yahoo.co.uk Tel: ? ? ?+44 (0)1751 417478 Mobile: +44 (0)7973 801133 -------------- next part -------------- An HTML attachment was scrubbed... URL: From briana.abrahms at noaa.gov Thu Aug 23 11:29:47 2018 From: briana.abrahms at noaa.gov (Briana Abrahms) Date: Thu, 23 Aug 2018 11:29:47 -0700 Subject: [MARMAM] New publication on fitness benefits to elephant seals of foraging in dynamic ocean structures Message-ID: Dear colleagues, We are pleased to share the recent publication of our paper in Proceedings of the Royal Society Biological Sciences: Abrahms, B., Scales, K.L., Hazen, E.L., Bograd, S.J., Schick, R.S., Robinson, P.W., and Costa, D.P. 2018. Mesoscale activity facilitates energy gain in a top predator. *Proceedings of the Royal Society Biological Sciences*, 285: 20181101. DOI: 10.1098/rspb.2018.1101. Abstract: How animal movement decisions interact with the distribution of resources to shape individual performance is a key question in ecology. However, links between spatial and behavioural ecology and fitness consequences are poorly understood because the outcomes of individual resource selection decisions, such as energy intake, are rarely measured. In the open ocean, mesoscale features (approx. 10 ?100 km) such as fronts and eddies can aggregate prey and thereby drive the distribution of foraging vertebrates through bottom-up biophysical coupling. These productive features are known to attract predators, yet their role in facilitating energy transfer to top-level consumers is opaque. We investigated the use of mesoscale features by migrating northern elephant seals and quantified the corresponding energetic gains from the seals? foraging patterns at a daily resolution. Migrating elephant seals modified their diving behaviour and selected for mesoscale features when foraging. Daily energy gain increased significantly with increasing mesoscale activity, indicating that the physical environment can influence predator fitness at fine temporal scales. Results show that areas of high mesoscale activity not only attract top predators as foraging hotspots, but also lead to increased energy transfer across trophic levels. Our study provides evidence that the physical environment is an important factor in controlling energy flow to top predators by setting the stage for variation in resource availability. Such understanding is critical for assessing how changes in the environment and resource distribution will affect individual fitness and food web dynamics. An online version of the article can be accessed here: http://rspb. royalsocietypublishing.org/cgi/reprint/rspb.2018.1101? ijkey=xbfA37Bzxndnsw0&keytype=ref Best wishes, Briana Abrahms and coauthors -------------- next part -------------- An HTML attachment was scrubbed... URL: From tbohuszewicz at marineventures.com Wed Aug 22 09:48:01 2018 From: tbohuszewicz at marineventures.com (Teresa Bohuszewicz) Date: Wed, 22 Aug 2018 16:48:01 +0000 Subject: [MARMAM] Potential visual PSO opportunity Message-ID: Visual PSO needed for offshore Massachusetts work. Expected duration is 2-3 weeks. 24-hour operation. Use of reticled binoculars is required. Night vision binoculars will be provided, when needed. Experience monitoring cetaceans in the wild is required. Must be able to legally work in US waters. Please, contact Teresa at TBohuszewicz at marineventures.com. Teresa (Bohuszewicz) Espy | MMO/PSO Services Mgr Marine Ventures International, Inc. 8524 SW Kansas Avenue Stuart, FL USA 34997 +1 772-419-9627 Main Office +1 772 419-9634 Direct +1 321-537-3291 (no longer active) +1 772-419-9628 Fax www.marineventures.com [marine-ventures-logo-v14b-font-5] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.jpg Type: image/jpeg Size: 13695 bytes Desc: image001.jpg URL: From oliverhooker at prstatistics.com Wed Aug 22 08:38:45 2018 From: oliverhooker at prstatistics.com (Oliver Hooker) Date: Wed, 22 Aug 2018 16:38:45 +0100 Subject: [MARMAM] Applied Bayesian modelling for ecologists and epidemiologists In-Reply-To: References: <3ba38e8ef8f009eec836487821b63986@prstatistics.com> Message-ID: <1b3194505eba520025871edbcbf40044@prstatistics.com> Applied Bayesian modelling for ecologists and epidemiologists (ABME04) This course will be delivered by Matt Denwood in Glasgow City Centre from 15th - 19th October 2018. https://www.prstatistics.com/course/applied-bayesian-modelling-for-ecologists-and-epidemiologists-abme04/ Please feel free to share anywhere you see fit. Course Overview: This application-driven course will provide a founding in the basic theory & practice of Bayesian statistics, with a focus on MCMC modeling for ecological & epidemiological problems. Starting from a refresher on probability & likelihood, the course will take students all the way to cutting-edge applications such as state-space population modelling & spatial point-process modelling and will be of interest to anyone studying population ecology of marine mammals. By the end of the week, you should have a basic understanding of how common MCMC samplers work and how to program them, and have practical experience with the BUGS language for common ecological and epidemiological models. The experience gained will be a sufficient foundation enabling you to understand current papers using Bayesian methods, carry out simple Bayesian analyses on your own data and springboard into more elaborate applications such as dynamical, spatial and hierarchical modelling. Intended Audience Research postgraduates, practicing academics and primary investigators in ecology and epidemiology and professionals in government and industry. Monday 15th ? Classes from 09:00 to 17:00 Module 1: Revision of likelihoods using full likelihood profiles and an introduction to the theory of Bayesian statistics. Probability and likelihood. Conditional, joint and total probability, independence, Baye?s law. Probability distributions. Uniform, Bernoulli, Binomial, Poisson, Gamma, Beta and Normal distributions ? their range, parameters and common uses of Likelihood and parameter estimation by maximum likelihood. Numerical likelihood profiles and maximum likelihood. Introduction to Bayesian statistics. Relationship between prior, likelihood & posterior distributions. Summarising a posterior distribution; The philosophical differences between frequentist & Bayesian statistics, & the practical implications of these. Applying Bayes? theorem to discrete & continuous data for common data types given different priors. Building a posterior profile for a given dataset, & compare the effect of different priors for the same data. Tuesday 16th ? Classes from 09:00 to 17:00 Module 2: An introduction to the workings of MCMC, and the potential dangers of MCMC inference. Participants will program their own (basic) MCMC sampler to illustrate the concepts and fully understand the strengths and weaknesses of the general approach. The day will end with an introduction to the bugs language. Introduction to MCMC. The curse of dimensionality & the advantages of MCMC sampling to determine a posterior distribution. Monte Carlo integration, standard error, & summarising samples from posterior distributions in R. Writing a Metropolis algorithm & generating a posterior distribution for a simple problem using MCMC. Markov chains, autocorrelation & convergence. Definition of a Markov chain. Autocorrelation, effective sample size and Monte Carlo error. The concept of a stationary distribution and burnin. Requirement for convergence diagnostics, and common statistics for assessing convergence. Adapting an existing Metropolis algorithm to use two chains, & assessing the effect of the sampling distribution on the autocorrelation. Introduction to BUGS & running simple models in JAGS. Introduction to the BUGS language & how a BUGS model is translated to an MCMC sampler during compilation. The difference between deterministic & stochastic nodes, & the contribution of priors & the likelihood. Running, extending & interpreting the output of simple JAGS models from within R using the runjags interface. Wednesday 17th ? Classes from 09:00 to 17:00 Module 3: Common models for which jags/bugs would be used in practice, with examples given for different types of model code. All aspects of writing, running, assessing and interpreting these models will be extensively discussed so that participants are able and confident to run similar models on their own. There will be a particularly heavy focus on practical sessions during this day. The day will finish with a discussion of how to assess the fit of mcmc models using the deviance information criterion (dic) and other methods. Using JAGS for common problems in biology. Understanding and generating code for basic generalised linear mixed models in JAGS. Syntax for quadratic terms and interaction terms in JAGS. Essential fitting tips and model selection. The need for minimal cross-correlation and independence between parameters and how to design a model with these properties. The practical methods and implications of minimizing Monte Carlo error and autocorrelation, including thinning. Interpreting the DIC for nested models, and understanding the limitations of how this is calculated. Other methods of model selection and where these might be more useful than DIC. Most commonly used methods Rationale and use for fixed threshold, ABGD, K/theta, PTP, GMYC with computer practicals. Other methods, Haplowebs, bGMYC, etc. with computer practicals. Thursday 18th ? Classes from 09:00 to 17:00 Module 4: The flexibility of MCMC, and precautions required for using MCMC to model commonly encountered datasets. An introduction to conjugate priors and the potential benefits of exploiting gibbs sampling will be given. More complex types of models such as hierarchical models, latent class models, mixture models and state space models will be introduced and discussed. The practical sessions will follow on from day 3. General guidance for model specification. The flexibility of the BUGS language and MCMC methods. The difference between informative and diffuse priors. Conjugate priors and how they can be used. Gibbs sampling. State space models. Hierarchical and state space models. Latent class and mixture models. Conceptual application to animal movement. Hands-on application to population biology. Conceptual application to epidemiology. Friday 19th ? Classes from 09:00 to 17:00 Module 5: Additional practical guidance for the use of Bayesian methods in practice, and finish with a brief overview of more advanced Bayesian tools such as Integrated Nested Laplace Approximation (INLA) and stan. Additional Bayesian methods. Understand the usefulness of conjugate priors for robust analysis of proportions (Binomial and Multinomial data). Be aware of some methods of prior elicitation. Advanced Bayesian tools. Strengths and weaknesses of INLA compared to BUGS. Strengths and weaknesses of stan compared to BUGS. Email oliverhooker at prstatistics.com Check out our sister sites, www.PRstatistics.com (Ecology and Life Sciences) www.PRinformatics.com (Bioinformatics and data science) www.PSstatsistics.com (Behaviour and cognition) 1. October 1st ? 5th TIME SERIES MODELS FOR ECOLOGISTS (TSME02) Glasgow, Dr Andrew Parnell https://www.prstatistics.com/course/time-series-models-foe-ecologists-tsme02/ 2. October 1st ? 5th 2018 INTRODUCTION TO LINUX WORKFLOWS FOR BIOLOGISTS (IBUL03) Glasgow, Scotland, Dr. Martin Jones https://www.prinformatics.com/course/introduction-to-linux-workflows-for-biologists-ibul03/ 3. October 8th ? 12th 2018 INTRODUCTION TO FREQUENTIST AND BAYESIAN MIXED (HIERARCHICAL) MODELS (IFBM01) Glasgow, Scotland, Dr Andrew Parnell https://www.psstatistics.com/course/introduction-to-frequentis-and-bayesian-mixed-models-ifbm01/ 4. October 15th ? 19th 2018 APPLIED BAYESIAN MODELLING FOR ECOLOGISTS AND EPIDEMIOLOGISTS (ABME04) Glasgow, Scotland, Dr. Matt Denwood, Emma Howard http://www.prstatistics.com/course/applied-bayesian-modelling-ecologists-epidemiologists-abme04/ 5. October 23rd ? 25th 2018 INTRODUCTIUON TO R (This is a private ?in-house? course) London, England, Dr William Hoppitt 6. October 29th ? November 2nd 2018 INTRODCUTION TO R AND STATISTICS FOR BIOLOGISTS (IRFB02) Glasgow, Scotland, Dr. Olivier Gauthier https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-biologists-irfb02/ 7. October 29th ? November 2nd 2018 INTRODUCTION TO BIOINFORMATICS FOR DNA AND RNA SEQUENCE ANALYSIS (IBDR01) Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw-genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/ 8. November 5th ? 8th 2018 PHYLOGENETIC COMPARATIVE METHODS FOR STUDYING DIVERSIFICATION AND PHENOTYPIC EVOLUTION (PCME01) Glasgow, Scotland, Dr. Antigoni Kaliontzopoulou https://www.prstatistics.com/course/phylogenetic-comparative-methods-for-studying-diversification-and-phenotypic-evolution-pcme01/ 9. November 19th ? 23rd 2018 STRUCTUAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (SEMR02) Glasgow, Scotland, Dr. Jonathan Lefcheck https://www.prstatistics.com/course/structural-equation-modelling-for-ecologists-and-evolutionary-biologists-semr02/ 10. November 26th ? 30th 2018 FUNCTIONAL ECOLOGY FROM ORGANISM TO ECOSYSTEM: THEORY AND COMPUTATION (FEER01) Glasgow, Scotland, Dr. Francesco de Bello, Dr. Lars G?tzenberger, Dr. Carlos Carmona http://www.prstatistics.com/course/functional-ecology-from-organism-to-ecosystem-theory-and-computation-feer01/ 11. December 3rd ? 7th 2018 INTRODUCTION TO BAYESIAN DATA ANALYSIS FOR SOCIAL AND BEHAVIOURAL SCIENCES USING R AND STAN (BDRS01) Glasgow, Dr. Mark Andrews https://www.psstatistics.com/course/introduction-to-bayesian-data-analysis-for-social-and-behavioural-sciences-using-r-and-stan-bdrs01/ 12. January 21st ? 25th 2019 STATISTICAL MODELLING OF TIME-TO-EVENT DATA USING SURVIVAL ANALYSIS: AN INTRODUCTION FOR ANIMAL BEHAVIOURISTS, ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (TTED01) Glasgow, Scotland, Dr. Will Hoppitt https://www.psstatistics.com/course/statistical-modelling-of-time-to-event-data-using-survival-analysis-tted01/ 13. January 21st ? 25th 2019 ADVANCING IN STATISTICAL MODELLING USING R (ADVR08) Glasgow, Scotland, Dr. Luc Bussiere, Dr. Tom Houslay http://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr08/ 14. January 28th? February 1st 2019 AQUATIC ACOUSTIC TELEMETRY DATA ANALYSIS AND SURVEY DESIGN Glasgow, Scotland, VEMCO staff and affiliates https://www.prstatistics.com/course/aquatic-acoustic-telemetry-data-analysis-atda01/ 15. 4th ? 8th February 2019 DESIGNING RELIABLE AND EFFICIENT EXPERIMENTS FOR SOCIAL SCIENCES (DRES01) Glasgow, Scotland, Dr. Daniel Lakens https://www.psstatistics.com/course/designing-reliable-and-effecient-experiments-for-social-sciences-dres01/ 16. February 11th ? 15th 2019 REPRODUCIBLE DATA SCIEDNCE FOR POPULATION GENETICS Glasgow, Scotland, Dr. Thibaut Jombart, Dr. Zhain Kamvar https://www.prstatistics.com/course/reproducible-data-science-for-population-genetics-rdpg02/ 17. 25th February ? 1st March 2019 MOVEMENT ECOLOGY (MOVE02) Margam Discovery Centre, Wales, Dr. Luca Borger, Prof. Ronny Wilson, Dr Jonathan Potts https://www.prstatistics.com/course/movement-ecology-move02/ 18. March 4th ? 8th 2019 BIOACUSTIC DATA ANALYSIS Glasgow, Scotland, Dr. Paul Howden-Leach https://www.prstatistics.com/course/bioacoustics-for-ecologists-hardware-survey-design-and-data-analysis-biac01/ 19. March 11th ? 15th 2019 ECOLOGICAL NICHE MODELLING USING R (ENMR03) Glasgow, Scotland, Dr. Neftali Sillero http://www.prstatistics.com/course/ecological-niche-modelling-using-r-enmr03/ 20. MARCH 18TH ? 22ND 2019 INRODUCTION TO R FOR BIOMEDICAL SCIENCES (IRBM01) Crete, Greece, Dr Aristides (Aris) Moustakas Link to follow soon 21. March 25th ? 29th 2019 LANDSCAPE GENETIC/GENOMIC DATA ANALYSIS USING R (LNDG03) Glasgow, Scotland, Prof. Rodney Dyer http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/ 22. A pril 1st ? 5th 2019 INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R (IPSY01) Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy02/ 23. April 8th ? 12th MACHINE LEARNING Glasgow Scotland, Dr Aristides (Aris) Moustakas https://www.prstatistics.com/course/machine-learning-using-r-mlur01/ -- Oliver Hooker PhD. PR statistics 2018 publications - Alternative routes to piscivory: Contrasting growth trajectories in brown trout (Salmo trutta) ecotypes exhibiting contrasting life history strategies. Ecology of Freshwater Fish. DOI to follow Phenotypic and resource use partitioning amongst sympatric lacustrine brown trout, Salmo trutta. Biological Journal of the Linnean Society. DOI 10.1093/biolinnean/bly032 prstatistics.com facebook.com/prstatistics/ twitter.com/PRstatistics groups.google.com/d/forum/pr-statistics-post-course-forum prstatistics.com/organiser/oliver-hooker/ 6 Hope Park Crescent Edinburgh EH8 9NA +44 (0) 7966500340 From jessyofadrigole at gmail.com Fri Aug 24 08:03:11 2018 From: jessyofadrigole at gmail.com (Niall MacAllister) Date: Fri, 24 Aug 2018 16:03:11 +0100 Subject: [MARMAM] Inshore cetacean distribution off the South West coast of Ireland Message-ID: An opportunity exists to join a sailing expedition off the South West Coast of Ireland to take part in a survey looking at the spatial and temperate distribution of cetaceans - with particular emphasis for habitat preference and the dynamic variables that affect such habitat. Participants will be expected to participate in a visual survey of the area and record sightings using Logger 2010 (courtesy of IFAW and Marine Conservation Research).The expedition will be run over 2 separate weeks (7 days and 7 nights each ) 7 ? 13 October and 15 ? 21 October 2018 with participants taking part in one or both weeks. The survey will be conducted during daylight hours only and the boat will return to the coast each evening to moor or anchor in the bays of the Irish south west coast. The cost for one week is ?800 and ?1300 for 2 weeks. The cost includes accommodation on board a 37ft sailing yacht, all food, fuel, marina fees and sailing gear. There is a break of 2 nights between each week where participants on the 2 week trip can make their own arrangements for food and accommodation. For undergrad and masters students interested in a particular subject for their thesis which relates to the area and marine fauna therein, we can arrange the expeditions to accommodate their particular subject if enough notice is given For more information contact Niall Mac Allister at wildatlanticwildlife at gmail.com or jessyofadrigole at gmail.com -------------- next part -------------- An HTML attachment was scrubbed... URL: From karinabohrerdoamaral at gmail.com Mon Aug 27 12:36:37 2018 From: karinabohrerdoamaral at gmail.com (Karina Amaral) Date: Mon, 27 Aug 2018 16:36:37 -0300 Subject: [MARMAM] New Publication: Reassessment of the franciscana Pontoporia blainvillei (Gervais & d'Orbigny, 1844) distribution and niche characteristics in Brazil Message-ID: Dear MARMAM readers, My co-authors and I are pleased to announce a new publication in the Journal of Experimental Marine Biology and Ecology: Do Amaral, Karina Bohrer; Danilewicz, Daniel; Zerbini, Alexandre; Di Beneditto, Ana Paula; Andriolo, Artur; Alvares, Diego Janish; Secchi, Eduardo; Ferreira, Emanuel; Sucunza, Federico; Borges-Martins, M?rcio; Santos, Marcos C?sar de O.; Cremer, Marta; Denuncio, Pablo; Ott, Paulo Henrique; Moreno, Ignacio. Reassessment of the franciscana *Pontoporia blainvillei *(Gervais & d'Orbigny, 1844) distribution and niche characteristics in Brazil. Journal of Experimental Marine Biology and Ecology, v. 508, p. 1-12, 2018. Doi: https://doi.org/10.1016/j.jembe.2018.07.010 Abstract: The franciscana (*Pontoporia blainvillei*) is the most threatened small cetacean of South America. The species is endemic to coastal waters of the western South Atlantic Ocean, where it is distributed from Ita?nas (Brazil) to Golfo San Matias (Argentina). Its range was divided in four Franciscana Management Areas (FMAs) for conservation purposes. However, the distribution of the franciscana is not continuous along its range, with two hiatuses proposed in southeastern Brazilian coast. The absence of franciscana records in these regions has been con?rmed by multiple years of research, however the reasons for this discontinuous distribution is not well understood. In this study, information on the distribution of the franciscana in south and southeastern Brazil is updated and new limits for FMAs are proposed. NicheA 3.0 software was used to investigate the environmental suitability of distributional gaps in relation to four weakly correlated, allegedly relevant descriptors of franciscana's distribution. In total, 788 records from dedicated aerial and boat surveys and bycatch were used to verify and to con?rm the new FMAs limits proposed by franciscana's experts previously. The distributional gaps were reshaped and de?ned as following: Gap I from Piraqu?-A?u River Mouth, Santa Cruz (19?57?S) in the state of Esp?rito Santo to Barra de Itabapoana (21?18?S) in the state of Rio de Janeiro; and Gap II from Arma??o dos B?zios (22?44?S) to Piraquara de Dentro (22?59 ?S) in Rio de Janeiro. The ecological niche model indicated that distributional gaps are inside franciscana's fundamental niche, and are relatively suitable in terms of salinity, temperature, di?use attenuation and bathymetry. However, the narrow of continental shelf seems to be the main factor explaining the absence of franciscanas in the distributional gaps as well as for the di?erentiation of some of the FMAs proposed. Narrowness of continental shelf seems to be intensifying the dynamics of biotic inter-actions promoting food competition for example, and/or causing geographic limitation to maintain minimal viable population size in present or past times periods. Please, send an email to karinabohrerdoamaral at gmail.com to request a full PDF. Best regards, Karina. -- *Karina Bohrer do Amaral* Doutora em Biologia Animal https://www.researchgate.net/profile/Karina_Do_Amaral Curr?culo Lattes: http://lattes.cnpq.br/1366481119780531 -------------- next part -------------- An HTML attachment was scrubbed... URL: From jerome.couvat at ntymail.com Mon Aug 27 06:55:59 2018 From: jerome.couvat at ntymail.com (=?utf-8?B?SsOpcsO0bWU=?= Couvat) Date: Mon, 27 Aug 2018 15:55:59 +0200 (CEST) Subject: [MARMAM] URGENT volunteer positions needed in Corsica (Mediterranean Sea) Message-ID: <2095535976.26328640.1535378159602.JavaMail.zimbra@ntymail.com> Dear MARMAMers, Participe Futur is a French NGO created in 2004 for the conservation of the marine environment. It encourages the discovery and study of our environment for the sake of sustainable protection and conservation by: - organising eco-volunteer missions at sea with experienced naturalists; - taking part in scientific programmes providing its experience and logistics; - broadcasting the results of its studies to raise awareness through articles, conferences, events and the media; - organising activities in schools in relation to the protection of the marine environment; - collaborating with NGOs, institutes, foundations or any other organisation working for the same goals and sharing the same ethics. In the framework of its summer expeditions, Participe Futur is seeking volunteers to take part in expeditions around Corsica on-board its sailing boat "Alcyon" in order to collect data on cetacean abundance and plastic pollution. The expeditions will take place from September 1 to September 13 and September 15 to September 27. Volunteers must: - be fluent in French; - be willing to spend days at sea collecting data; - be comfortable with group life in a reduce space and promiscuity linked to life on-board a sailing boat; - take part in daily task such as cooking and dish washing. Further details and registration information is available on our website: http://participefutur.org/calendrier-2018.html Regards,The Participe Futur team -------------- next part -------------- An HTML attachment was scrubbed... URL: From pwarzybok at pointblue.org Mon Aug 27 11:56:32 2018 From: pwarzybok at pointblue.org (Pete Warzybok) Date: Mon, 27 Aug 2018 18:56:32 +0000 Subject: [MARMAM] Volunteer elephant seal research assistant - Southeast Farallon Island Message-ID: VOLUNTEER OPPORTUNITIES ON THE FARALLON ISLANDS Point Blue Conservation Science is looking for Volunteer Elephant Seal Research Assistants (3-4) for winter 2018/2019 on Southeast Farallon Island. Research Assistant (RA) responsibilities include, but are not limited to, censusing and monitoring breeding elephant seals, flipper tagging animals, resighting tagged California and Steller's Sea Lions, Harbor Seals and Northern Fur Seals, and surveying for salamanders, crickets, songbirds, seabirds, gulls, burrowing owls, and whales. (Sorry, White sharks are unlikely during the winter months). RAs also contribute to the upkeep and maintenance of the research station and help with food preparation. RAs will work full-time, 7 days a week, with a variable schedule that includes long days and night work. Some field work requires rigorous physical activity including strenuous hiking and climbing. Applicants should enjoy working independently with a high level of responsibility in field work and data entry as well as working frequently with a partner or team. Preference will be given to applicants with a degree in biology or related field and prior ecological research experience. Enthusiasm for field work in windy, cold conditions is essential. The ability to coexist on a small, isolated island with the same crew for several months is essential. If the thought of going several days without updating your Instagram or Facebook page is shocking, then this is not the job for you. Positions are available 1 December 2018 through 30 March 2019 with a minimum 8-week commitment. However, strong preference will be given to applicants who are available for the entire period. We provide transportation to the island and great food and housing. Transportation to San Francisco is not provided. More information can be found at pointblue.org. To apply, please email a cover letter explaining your interests, your resume, dates of availability, and 3 professional references to Pete Warzybok (pwarzybok at pointblue.org). Applications accepted until 30 September 2018 but will be evaluated as they are received so some positions may be filled before the deadline. --------------------------------------------------------- Pete Warzybok Senior Marine Ecologist, Farallon Program & Farallon Patrol Coordinator Point Blue Conservation Science 3820 Cypress Drive, Suite 11, Petaluma, CA 94954 707-781-2555 ext. 344 (office) 415-233-1384 (patrol cell) 415-367-7482 (island) www.pointblue.org | Follow Point Blue on Facebook! Point Blue-Conservation science for a healthy planet. -------------- next part -------------- An HTML attachment was scrubbed... URL: From simon.elwen at gmail.com Mon Aug 27 01:12:38 2018 From: simon.elwen at gmail.com (Simon Elwen) Date: Mon, 27 Aug 2018 10:12:38 +0200 Subject: [MARMAM] Training and internship opportunities - Namibia and South Africa Message-ID: Sea Search Research and Conservation is offering the opportunity for interested students and young researchers to join our projects to get real work experience working with an active research group on our projects in Southern Africa. The internships are research focused with an emphasis on learning (and using) field skills used in cetacean research such as photo-ID, acoustic and behavioural data collection, strandings response as well as data management and team work. There is also a component of outreach work in all projects. Interns will work closely with the project leaders Dr Tess Gridley and Dr Simon Elwen. We are open to students using data collected during internships for student projects. Three type of opportunity are available at different times of year. 1) Long-term volunteer at Sea Search offices - Cape Town, South Africa - 2 month minimum - Oct 2018 to May 2019 - mix of office/analytical/data processing/outreach and field work. Field work covering multiple species , with a special focus on feeding humpback whales on the west coast over autumn and summer. 2) Long-term volunteer at the Namibian Dolphin Project office in Walvis Bay Namibia - 2 month minimum - Oct 2018 to May 2019 - - mix of office/outreach and field work. Research focuses on bottlenose and Heaviside's dolphins, strandings response, outreach with schools, data collection from tour boats and assisting with ~2-4 boat surveys /month 3) Field intensive training internships at the Namibian Dolphin Project in Walvis Bay Namibia - 1 month minimum - Oct 2018 to May 2019. Interns will assist the research team during our main field work period with daily field work on a range of topics. There is a strong field skills training component during this time. There is a cost associated with each internship to help cover training, accommodation etc. PLEASE CONTACT *info at seasearch.co.za for FURTHER DETAILS. *Please include your CV, availability and a brief motivation of the interests More information can be found on the Namibian Dolphin Project (Namibia) and our umbrella organisation Sea Search Research and Conservation (South Africa) by following these links (www.namibiandolphinproject.org, www.seasearch.co.za) -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- Simon Elwen Ph.D. NRF Research Fellow at the Mammal Research Institute, University of Pretoria Based at Sea Search Africa - 4 Bath Rd, Muizenberg, Cape Town. Phone: +27 21 788 1206 (Office SA), +27 71 139 5951 (Mob SA) www.seasearch.co.za & www.namibiandolphinproject.org The first *African Bioacoustics Community conference will be held in Cape Town on the **3rd-7th December 2018*. Our aim is to provide a forum within which people working on all aspects of bio-acoustic research can network and communicate. https://africanbioacoustic.wixsite.com/abcommunity https://www.facebook.com/africanbioacousticscommunity/ -------------- next part -------------- An HTML attachment was scrubbed... URL: From B.L.Chilvers at massey.ac.nz Mon Aug 27 15:20:41 2018 From: B.L.Chilvers at massey.ac.nz (Chilvers, Louise) Date: Mon, 27 Aug 2018 22:20:41 +0000 Subject: [MARMAM] Online Oiled Wildlife Response Training Message-ID: Online Oiled Wildlife Response Training The University of California at Davis, USA and Massey University, New Zealand have jointly developed university endorsed and research driven online Oiled Wildlife Response Training (OWRT). The first level "Foundations in oiled wildlife response" is now online and available for participation at https://owrt.org/. Second level courses including "Rehabilitation and facilities in oiled wildlife response" will be available by early 2019. These courses are developed by the only two Universities in the world with comprehensive oiled wildlife readiness and response programs. These world leaders in higher education are also at the forefront of oiled wildlife research - advancing knowledge of best practice in the management and care of oiled wildlife. UC Davis and Massey University have led more than 70 oiled wildlife responses throughout the world, meaning this OWRT has been developed and delivered by highly experienced oil response researchers, trainers, and practitioners. OWRT trains to international best practice standards for oiled wildlife response and management. For more information and to enrol please visit our website https://owrt.org/ Foundations Course Overview: Foundations in oiled wildlife response covers the fundamental elements needed for a person to be involved in an oiled wildlife response. There are eight online modules to the Foundations course including: Topic 1: Petroleum * Components and types of petroleum * Hazard and risk associated petroleum * Weathering of oil Topic 2: Historical spill information * The changing sources of spilled oil * Circumstances and consequences of example oil spills Topic 3: Effects of petroleum when spilled * Areas affected by an oil spill * The effects of oil on animals Topic 4: Advanced preparation for oil spills (Preparedness) * Advanced planning necessary to respond to an oil spill Topic 5: The oil spill response * Goals of an oil spill response * Overall oil spill response timeline * Overall oil spill response structure * Rules governing an oil spill response Topic 6: The oiled wildlife response * Why we respond to wildlife * Goals of a wildlife response * Factors affecting the scope of a wildlife response * Functional activities of an oiled wildlife response Topic 7: You as a responder * Notification, mobilization and demobilization * How to get hands on experience * Go-bag * Considerations Topic 8: Health and Safety * Human safety first * Types of hazards * Reducing risk * Hot zone, cold zone and warm zone/contamination reduction zone For more information and to enrol please visit our website https://owrt.org/ [cid:image001.jpg at 01D43EB8.C4976DF0] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.jpg Type: image/jpeg Size: 23455 bytes Desc: image001.jpg URL: From tom.broughnz at gmail.com Tue Aug 28 14:27:18 2018 From: tom.broughnz at gmail.com (Tom Brough) Date: Wed, 29 Aug 2018 09:27:18 +1200 Subject: [MARMAM] New paper on hotspots for Hector's dolphin Message-ID: Kia ora MARMAM, On behalf of my co-authors I'm pleased to announce the following publication in Marine Mammal Science. Tom Brough, William Rayment, Elisabeth Slooten and Steve Dawson. 2018. Fine scale distribution for a population of New Zealand's only endemic cetacean (*Cephalorhynchus hectori*) shows long-term stability of coastal hotspots. Marine Mammal Science. DOI: 10.1111/mms.12528 Abstract Marine mammal populations often have ?hotspots? of distribution. Understanding what drives these is important for understanding relationships with habitat and evaluating exposure to threats. Few studies investigate the stability of hotspots, yet this information is vital in assessing their importance. In this study, over 9,000 sightings made during systematic surveys over 29 yr are used to establish the existence, locations, and temporal dynamics of hotspots for Hector?s dolphins at Banks Peninsula, New Zealand. Sightings were divided into four seasons and three time periods to assess temporal trends in habitat use. Kernel density analysis was performed on sightings, weighted by survey effort. Density values at hotspots and reference areas were modeled according to season and time period using linear mixed models. Fifty percent of weighted sightings (n = 4,513) occurred within 21% of the study area. Hotspots had significantly higher densities during summer and these high-density areas have remained consistent over time. Such consistency implies importance of these areas to the dolphins? ecology. This information adds to our knowledge of how this endangered species uses its habitat, suggests candidate areas for protection from threats, and provides a baseline for assessing habitat related impacts on Hector?s dolphins at Banks Peninsula. Feel free to get in touch with me at tom.brough at otago.ac.nz if you'd like a PDF copy of the full text. Many thanks, Tom Brough *Marine Mammal Research Group* *Department of Marine Science* *University of Otago, Dunedin* *Aotearoa/New Zealand* *http://whaledolphintrust.org.nz/ * *https://www.facebook.com/whaledolphintrust/ * -------------- next part -------------- An HTML attachment was scrubbed... URL: From awerth at hsc.edu Tue Aug 28 12:41:27 2018 From: awerth at hsc.edu (Alex Werth) Date: Tue, 28 Aug 2018 19:41:27 +0000 Subject: [MARMAM] New publication on morphology and evolution of whale filtration Message-ID: Dear MARMAM colleagues, On behalf of my coauthors I am pleased to announce the early publication of our new paper in the Biological Journal of the Linnean Society on the morphology and evolution of mysticete filter feeding: Alexander J. Werth, Jean Potvin, Robert E. Shadwick, Megan M. Jensen, David E. Cade, and Jeremy A. Goldbogen. 2018. Filtration area scaling and evolution in mysticetes: trophic niche partitioning and the curious cases of sei and pygmy right whales. Biological Journal of the Linnean Society, https://doi.org/10.1093/biolinnean/bly121. Abstract: We analyzed the functional morphology and hydrodynamics of the filtering apparatus in ten species of baleen whales (Mysticeti). Our results demonstrate a clear demarcation in baleen scaling of continuous ram filter feeders (Balaenidae; right and bowhead whales) and intermittent lunge/suction feeders: rorquals (Balaenopteridae) and the gray whale (Eschrichtiidae). In addition to different scaling trajectories, filter area varies widely among taxa. Balaenid baleen has 4-5x the area of similarly-sized rorquals (by body length and mass). Filter areas correlate with morphology; lineages evidently evolved to exploit different types of patchy prey. Feeding performance data from hydrodynamic modeling and tagged whales suggest that drag forces limit balaenids, whereas time required to purge and filter engulfed water appears to limit rorquals. Because scaling of engulfment volume outpaces increases in baleen area, large rorquals must devote greater proportions of dive time to filtration. In contrast, balaenids extend dive duration, but as a trade-off are limited to slow engulfment speeds and therefore can only target prey with low escape capabilities. The sei whale, Balaenoptera borealis, has a mid-range filter reflecting its transitional diet and intermediate morphology, embodying generalized characteristics of both continuous ram and intermittent lunge filtration. The pygmy right whale, Caperea marginata, has a balaenid-type filter via 2D analysis, but enhanced 3D modeling shows Caperea's baleen fits better with rorquals. Allometric equations relating body and filter size address phylogenetic questions about filtration in extinct lineages, including future ancestor state reconstruction analyses. Based on baleen and body size (~5m) and skull morphology, the earliest edentulous mysticetes were likely intermittent rather than continuous filterers, with simple baleen. If you are interested please contact me for a pre-print pdf. Alex Werth _______________________________ Alexander J. Werth, Ph.D. Trinkle Professor of Biology Hampden-Sydney College Box 162, Hampden-Sydney, VA 23943 434-223-6326, fax 434-223-6374 http://www.hsc.edu/alex-werth -------------- next part -------------- An HTML attachment was scrubbed... URL: From danzeh01 at gmail.com Wed Aug 29 02:13:05 2018 From: danzeh01 at gmail.com (danzeh01) Date: Wed, 29 Aug 2018 11:13:05 +0200 Subject: [MARMAM] New Publication: Evidence of behavioural thermoregulation by dugongs at the high latitude limit to their range in eastern Australia Message-ID: My co-authors and I are pleased to announce the publication of our new paper: Daniel R. Zeh, Michelle R. Heupel, Mark Hamann, Rhondda Jones, Colin J. Limpus, Helene Marsh, Evidence of behavioural thermoregulation by dugongs at the high latitude limit to their range in eastern Australia,?Journal of Experimental Marine Biology and Ecology,?Volume 508,?2018,?Pages 27-34. Abstract Many species of marine mammals have evolved behavioural adaptations to minimise heat loss to the surrounding water. We tracked 21 dugongs (Dugong dugon) using acoustic and satellite/GPS transmitters in 2012, 2013 and 2014 in Moreton Bay, Queensland at the high latitude limit of the species? winter range in eastern Australia to examine if there was a relationship between movements and environmental temperature that might suggest behavioural thermoregulation. Oceanic waters immediately outside the bay where the dugong?s seagrass food is unavailable exhibited temperatures from 5.5oC warmer to 3oC cooler than the Eastern Banks, the major dugong habitat in the bay. All tracked dugongs made at least one (and up to 66) return trip(s) from the Eastern Banks to the adjacent oceanic waters. The probability of making an outgoing trip was highest in 2014 and lowest in 2013 when the water temperature inside the bay was higher than the other two years. The odds of making an outgoing trip were lower when temperature differences (outside minus inside) were small or negative but increased by a factor of up to 2.12 for each 1oC positive difference. Individual dugongs were most likely to travel out of the bay between midnight and noon on an outgoing tide or at slack high water and return to the bay on an incoming tide or slack low water between noon and midnight. The amount of time a dugong spent outside the bay on each trip was relatively short with an overall median of 5.9 hours. The dugongs? individual activity spaces generally declined as winter progressed suggesting a change in the cost-effectiveness of moving outside the bay. Our analysis adds to the evidence that dugongs undertake behavioural thermoregulation at least at the high latitude limits of their range. The paper is available for download free of charge until October 18, 2018 using this link:?https://authors.elsevier.com/a/1Xd~r51aUVTTN Thank you for your interest. Daniel Zeh -------------- next part -------------- An HTML attachment was scrubbed... URL: From K.Sprogis at murdoch.edu.au Wed Aug 29 19:46:22 2018 From: K.Sprogis at murdoch.edu.au (Kate Sprogis) Date: Thu, 30 Aug 2018 02:46:22 +0000 Subject: [MARMAM] New publication: Sex-specific differences in the seasonal habitat use of a coastal dolphin population. Message-ID: Dear colleagues, We are pleased to announce the publication of a new paper: Sprogis KR, Christiansen F, Raudino HC, Kobryn H, Wells RS, Bejder L (2018) Sex-specific differences in the seasonal habitat use of a coastal dolphin population. Biodiversity and Conservation. doi: 10.1007/s10531-018-1618-7 Summary: * Understanding the factors that contribute to a population?s habitat use is important for conservation planners and managers to identify reasons behind a population?s distribution. * Habitat use often differs between sexes, however few studies on sexually monomorphic species document this difference, resulting in misleading ecological interpretations and non-targeted management actions. * The aim of this study was to test for sex-specific differences in the seasonal habitat use of Indo-Pacific bottlenose dolphins (Tursiops aduncus) off Bunbury, Australia. * Systematic, boat-based, photographic identification dolphin surveys (n?=?587) were conducted across seasons over 6 years during 2007?2013. Generalised additive models explored relationships between the presence-absence of dolphins and sex, water depth and benthic habitat type. * Results highlighted that: (i) habitat use differed seasonally for males and females, (ii) depth had a strong influence on habitat use, which differed between sexes for summer, winter and spring, and (iii) there were no sex differences in habitat use in autumn, which coincides with the peak breeding season. In summer and autumn dolphins were concentrated in shallow, near-shore waters predominantly over reef and sand, and in winter and spring dolphins had a broader distribution over reef and mud/silt with the use of deeper, offshore waters. This pattern is consistent with the seasonally-dependent dolphin abundance that has been documented for this population. * Identification of sex differences in habitat use provides management agencies with insights to implement informed actions for the conservation of this coastal dolphin population which is forecast to decline by 50% in the next two decades (Manlik et al. 2016). This paper is available for viewing from Biodiversity and Conservation https://rdcu.be/5lXX, or a PDF can be provided via email request: k.sprogis at murdoch.edu.au For more information on the Bunbury dolphin population see: http://mucru.org/our-research/south-west-marine-research-program/ and our publication blog: http://mucru.org/new-publication-sex-specific-differences-in-the-seasonal-habitat-use-of-the-bunbury-dolphins/ Best regards, on behalf of my co-authors, Kate Sprogis, PhD Marie Sk?odowska-Curie Post-doctoral Fellow Marine Bioacoustics Lab, Dept. of Bioscience, Aarhus University, Denmark kate.sprogis at bios.au.dk | Kate Sprogis Photography Twitter, Instagram: @KateSprogis [id:image001.jpg at 01D43F8D.2D599050] Recent paper: Sprogis K.R., Christiansen F., Wandres M., Bejder L. 2018. El Ni?o Southern Oscillation influences the abundance and movements of a marine top predator in coastal waters. Global Change Biology, doi: https://doi.org/10.1111/gcb.13892 -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.jpg Type: image/jpeg Size: 5396 bytes Desc: image001.jpg URL: From sarah.stachura at gmail.com Tue Aug 28 09:53:44 2018 From: sarah.stachura at gmail.com (Sarah Kienle) Date: Tue, 28 Aug 2018 09:53:44 -0700 Subject: [MARMAM] New publication: Feeding strategies in seals Message-ID: Dear MARMAM members, My co-authors and I are excited to share our new manuscript "Comparative feeding strategies and kinematics in phocid seals: suction without specialized skull morphology" published in the Journal of Experimental Biology. Kienle, S. S., Hermann-Sorensen, H., Costa, D. P., Reichmuth, C., & Mehta, R. S. (2018). Comparative feeding strategies and kinematics in phocid seals: suction without specialized skull morphology. *Journal of Experimental Biology*, jeb-179424. Abstract: Feeding kinematic studies inform our understanding of behavioral diversity and provide a framework for studying the flexibility and constraints of different prey acquisition strategies. However, little is known about the feeding behaviors used by many marine mammals. We characterized the feeding behaviors and associated kinematics of captive bearded (Erignathus barbatus), harbor (Phoca vitulina), ringed (Pusa hispida) and spotted (Phoca largha) seals through controlled feeding trials. All species primarily used a suction feeding strategy but were also observed using a biting strategy, specifically pierce feeding. Suction feeding was distinct from pierce feeding and was characterized by significantly faster feeding times, smaller gapes and gape angles, smaller gular depressions and fewer jaw motions. Most species showed higher variability in suction feeding performance than in pierce feeding, indicating that suction feeding is a behaviorally flexible strategy. Bearded seals were the only species for which there was strong correspondence between skull and dental morphology and feeding strategy, providing further support for their classification as suction feeding specialists. Harbor, ringed and spotted seals have been classified as pierce feeders based on skull and dental morphologies. Our behavioral and kinematic analyses show that suction feeding is also an important feeding strategy for these species, indicating that skull morphology alone does not capture the true diversity of feeding behaviors used by pinnipeds. The ability of all four species to use more than one feeding strategy is likely advantageous for foraging in spatially and temporally dynamic marine ecosystems that favor opportunistic predators. I am happy to provide a pdf copy. Please email me directly at: sarah.stachura at gmail.com. Cheers, Sarah Kienle Ph.D. Candidate University of California Santa Cruz Long Marine Laboratory Santa Cruz, CA 95060 (512) 413-6431 sarah.stachura at gmail.com "Unless someone like you cares a whole awful lot, nothing is going to get better. It's not." ~The Lorax by Dr. Seuss -------------- next part -------------- An HTML attachment was scrubbed... URL: From srichardson at coastalstudies.org Wed Aug 29 10:19:04 2018 From: srichardson at coastalstudies.org (Stephanie Richardson) Date: Wed, 29 Aug 2018 13:19:04 -0400 Subject: [MARMAM] Right Whale Ecology Observer Internship 2019 - Provincetown, MA USA Message-ID: Right Whale Ecology Program - Observer Internship Center for Coastal Studies (CCS), Provincetown MA USA The Center for Coastal Studies (CCS), a nonprofit institution dedicated to the understanding and protection of our coastal environment and marine ecosystems, is seeking a seasonal Right Whale Ecology Program intern from January through May 2019. This long-term project focuses on documenting the abundance, distribution and behavior of North Atlantic right whales and their food resource in Cape Cod Bay and adjacent Massachusetts waters. The intern will be the primary vessel observer for the project and will participate in research cruises up to four days a week. Fieldwork responsibilities include photographing critically endangered North Atlantic right whales, collecting behavioral and environmental data, recording other sightings events (species, vessels and fishing gear), and working with a habitat research team both in the field and in the lab. Lab responsibilities include photo-analysis (downloading images, inputting sightings information, matching individuals to known animals using an online and in-house catalog, cataloging), database entry and maintenance, assisting the aerial team and maintaining vessel field equipment. Minimum Requirements: - A college degree, preferably in biological/ environmental sciences - Previous marine mammal survey experience, including experience in photo- identification of large cetaceans - Experience with digital SLR cameras, lenses, and filters - Basic computer literacy and experience using Microsoft Office programs (Excel, Word, PowerPoint). Experience with database entry and management is preferred - Experience working on boats, ability to withstand harsh elements, and not be prone to serious seasickness - Must be able to live and work well in a team - Enthusiasm and willingness to learn field and lab-based research methods - Strong attention to detail and ability to work well under pressure Preferred Qualifications: - Experience using iMatch image database software - Experience using GPS equipment - Ability to estimate object ranges from a vessel - Not prone to seasickness - A valid US driver?s license The successful applicant will be required to work a minimum of four full days per week and will need to be flexible for research cruises due to weather constrictions. The intern will often collect data independently in the field, thus responsible, detail-oriented applicants are encouraged to apply. Applicants must be available for the full field season and must be willing to work weekends, holidays and evenings as needed. Housing will be provided, as well as a small stipend to cover general living expenses. CCS has a long history of conservation and research work with the North Atlantic right whale and Cape Cod Bay has been a major critical habitat for over 50% of the estimated population in recent years. This is an excellent opportunity for anyone wishing to expand their skills in marine mammal survey techniques, and will offer the successful applicant the unique chance to work with one of the world?s most endangered cetaceans. This internship will afford the successful applicant an invaluable opportunity to work within a well-established institution, with highly-qualified scientists, and to gain experience in photo-identification, matching, and data entry and analysis. Experience in oceanographic sampling can also be gained. Details of our work can be found on our website: http://coastalstudies.org/right-whale-research/ How to Apply: The application package should include the following attachment(s): 1) A cover letter describing your specific interests in marine mammal science, internship qualifications, and how the experience would assist you in reaching career goals 2) CV/resume 3) College transcripts (unofficial are sufficient) 4) The names and contact information of two references Application materials must be e-mailed to Stephanie Richardson, srichardson at coastalstudies.org with the following text in the subject line: 2019 RW Observer Internship. *Deadline for submissions: September 30, 2018.* -------------- next part -------------- An HTML attachment was scrubbed... URL: From Susan.Steckler at smulteasciences.com Thu Aug 30 16:24:06 2018 From: Susan.Steckler at smulteasciences.com (Susan Steckler) Date: Thu, 30 Aug 2018 23:24:06 +0000 Subject: [MARMAM] PSO's and PAM Operators Needed - Smultea Sciences is Hiring! Message-ID: Work in the Atlantic searching for marine mammals and turtles! Previous PSO and/or PAM experience preferred. BIOSET or offshore marine survival training a must. See www.SmulteaSciences.com to download job description details. [http://static.wixstatic.com/media/8b4a94_17ad4a29080f493ac75ca4afbf271498.png] Smultea Sciences www.smulteasciences.com With Mari Smultea, M.Sc.'s illustrious career spanning almost three decades, Mari has become the undisputed industry leader in environmental innovations. Mari Susan Steckler Smultea Sciences susan at smulteasciences.com +1 425 922 7867 (Pacific Time) www.smulteasciences.com -------------- next part -------------- An HTML attachment was scrubbed... URL: From afernandezajo at gmail.com Wed Aug 29 08:39:54 2018 From: afernandezajo at gmail.com (=?UTF-8?Q?Alejandro_Apolo_Fern=C3=A1ndez_Aj=C3=B3?=) Date: Wed, 29 Aug 2018 08:39:54 -0700 Subject: [MARMAM] New ms Conservation Physiology Message-ID: I would like to share with the marman community our article recently published on Conservation Physiology journal. In this article I present our first finding on lifetime GCs on baleen samples and it?s correlation with intensity of gull wounding. I analyzed 2 SRW calves with non or minimum number of gull inflicted lesions and 2 heavily attacked ones. I also included the profile of a NARW calf dead acutely by ship-strike. The results are amazing and very promising: calves with no or minimum gull attack display very low GCS profiles whilst the GCs increase largely toward their death for the ones heavily attacked. Please, feel free to post the article if you find it of your interest. Here are the links to the online article and the you can find also the PDF attached: Abstract: https://academic.oup.com/conphys/article-abstract/doi/10.1093/conphys/coy045/5076881 Article (free access): https://academic.oup.com/conphys/article/doi/10.1093/conphys/coy045/5076881?guestAccessKey=c6a0ff1f-7eed-43d2-ae1e-ebe1488dca4f All the best, Alejandro. -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: SRW calf GC profiles.pdf Type: application/pdf Size: 476174 bytes Desc: not available URL: From srichardson at coastalstudies.org Wed Aug 29 10:24:46 2018 From: srichardson at coastalstudies.org (Stephanie Richardson) Date: Wed, 29 Aug 2018 13:24:46 -0400 Subject: [MARMAM] =?utf-8?q?Right_Whale_Ecology_Program_=E2=80=93_Habitat_?= =?utf-8?q?Internship=2C_Provincetown=2C_MA_USA?= Message-ID: Right Whale Ecology Program ? Habitat Internship Center for Coastal Studies (CCS) The Center for Coastal Studies (CCS), a nonprofit institution dedicated to the understanding and protection of our coastal environment and marine ecosystems, is seeking a seasonal Right Whale Ecology Program intern from January through May 2019. This long-term project focuses on documenting the abundance, distribution and behavior of North Atlantic right whales and their food resource in Cape Cod Bay and adjacent Massachusetts waters. The intern will assist the habitat research associate in the collection and processing of zooplankton in the field and lab. Fieldwork responsibilities include zooplankton collection through tow and pump techniques, marine observer, and environmental data collector. Lab responsibilities include zooplankton species identification and counts, plastics analysis, archiving samples, data entry and maintenance, and maintaining field equipment. Minimum Requirements - A college degree, preferably in biological/ environmental sciences - Good memorization skills and strong attention to details - Basic computer literacy and experience using Microsoft Office programs (Excel, Word, PowerPoint). Experience with database entry and management is preferred - Experience working on boats, ability to withstand harsh elements, and not be prone to serious seasickness - Must be able to live and work well in a team - Enthusiasm and willingness to learn field and lab-based research methods - Strong attention to detail and ability to work well under pressure Preferred Qualifications: - Plankton identification - Microscopy and laboratory experience - Not prone to seasickness - FTIR Spectrometer experience - A valid US driver?s license The successful applicant will be required to work a minimum of four full days per week and will need to be flexible for research cruises due to weather constrictions. The intern will often process zooplankton samples independently in the lab, thus responsible, detail-oriented applicants are encouraged to apply. Applicants must be available for the full five months and must be willing to work weekends, holidays and evenings as needed. Housing will be provided, as well as a small stipend to cover general living expenses. CCS has a long history of conservation and research work with the North Atlantic right whale and Cape Cod Bay has been a major critical habitat for over 50% of the estimated population in recent years. This is an excellent opportunity for anyone wishing to expand their skills in marine mammal survey techniques and zooplankton analysis; and will offer the successful applicant the unique chance to work with one of the world?s most endangered cetaceans. This internship will afford the successful applicant an invaluable opportunity to work within a well-established institution, with highly-qualified scientists, and to gain experience in boat-based research, zooplankton and environmental collections, plankton identification, plastic analysis, and data entry and analysis. Details of our work can be found on our website: http://coastalstudies.org/right-whale-research/ How to Apply: The application package should include the following attachment(s): 1) A cover letter describing your specific interests in marine mammal science, internship qualifications, and how the experience would assist you in reaching career goals 2) CV/resume 3) College transcripts (unofficial are sufficient) 4) The names and contact information of two references Application materials must be e-mailed to Stephanie Richardson, srichardson at coastalstudies.org with the following text in the subject line: 2019 RW Habitat Internship. *Deadline for submissions: September 30, 2018 * -------------- next part -------------- An HTML attachment was scrubbed... URL: From elena.fontanesi2 at studio.unibo.it Tue Aug 28 09:34:04 2018 From: elena.fontanesi2 at studio.unibo.it (Elena Fontanesi) Date: Tue, 28 Aug 2018 16:34:04 +0000 Subject: [MARMAM] LAST MINUTE OPENING: RESEARCH INTERN POSITION SEPTEMBER 2018 Message-ID: LAST MINUTE OPENING: RESEARCH INTERN POSITION SEPTEMBER 2018 Costa Balenae has a LAST MINUTE OPENING for a research intern position for our pilot project on bottlenose dolphins in the Western Ligurian Sea, Imperia (Italy) September 2018. Intern is requested to join the project by the 5th of September, the earlier the best. DUE TO THE LATE NOTICE, THE INTERNSHIP PRICE WILL BE REDUCED OF 40%. Programme: Interns are invited to assist the biologists of Costa Balenae in two different activities: 1. Research project on bottlenose dolphins: * Boat-based surveys (10-12 per month) * Photo-id matching/classwork * Data entry * Opportunistic surveys 2. Whale watching excursions: * Assisting the biologist on board * Collecting data of cetaceans and other marine fauna * Assisting the participants Schedule: Period: from 1st September to 30th September This is a great opportunity to get involved in cetacean research, enjoy marine biodiversity while gaining fieldwork experience, travelling and exploring the beautiful Liguria region while supporting cetacean research and conservation. Fieldwork will be made in coastal waters (Western Ligurian Sea). Surveys will be conducted onboard dedicated vessels (5-6 m inflatable boat) 10-12 times per month. Training will focus on collecting photo for photo-ID purposes, environmental, geographical (GPS) and dolphins' behavioural data. Fieldwork will help participants gaining first-hand experience in collecting data on free-ranging cetaceans and improve skills on cetaceans boat-based surveys as well as on the use of the photo-ID technique. Surveys are weather dependent and they can change during the period. Opportunistic surveys will be conducted on whale watching boats or different types of fishing boats. Interns will be involved 5 days a week, 6-8 hours/day (depending on fieldwork or labwork) During free time, interns will have the opportunity to experience all sorts of activities: swimming, diving, hiking, exploring historical sites, visit museums, sailing. Skills/qualification: * Minimum age of 18 * Prior experience in cetaceans or boat-based surveys is not required, but preferred * Degree or on-going studies in biology, natural science, veterinary or similar (preferred) * Strong motivation and interest in cetaceans and research * Speak, read and write in fluent English * Be adaptable as fieldwork is weather dependent * Be prepared to spend many hours on a small zodiac (5-6 m) and under the sun * Be sociable and willing as they are expected to live and work in an international team * Boat driving licence or experience in handling small boats (preferred) About the project The dolphins research project ?Delfini del Ponente? is the first project focused on monitoring bottlenose dolphins in the Western Ligurian Sea. Due to the morphology of the seafloor, this area is not a usual habitat for this species and historically, sightings have a been more rare and sporadic than in the Levantine side of the region. The continental shelf is, in fact, very short and high depths (around 2000 m) are reached quite close to the shore making the area suitable for other cetacean species but not for bottlenose dolphins, which tend to remain in waters with depth not exceeding 200 m. Despite this knowledge of the range of the species, an interesting change has been noted in recent years in the area. Reports of bottlenose dolphins by boats, fishermen and whale watching vessels are almost tripled compared to previous seasons. Therefore, the project aims to monitor bottlenose dolphins in the region to understand the extent of this change and what drove it. It is structured on an annual basis, in order to obtain data not only on the distribution during the summer, but also changes during the different seasons. Internship fee Delfini del Ponente is a self-funded research project, so participation in this programme requires a tuition fee. Fee includes the accommodation in an apartment in Imperia, tuition and all associated field costs during the internship period (use of research vessel, training, use of equipment, field trips). Transportation expenses to and from Imperia (Italy), own insurances, and food costs during the stay are not included in the fee. Information about Costa Balenae Costa Balenae is a cooperative organization founded by a group of biologists and naturalists with twenty years of experience in the fields of scientific research, environmental education, territorial development and sustainable tourism. The passion for nature, its conservation and the development of commercial tourism activities that make knowledge, awareness and sustainability a point of strong entrepreneurial imprinting are the main characteristic of the cooperative. How to apply: Send your CV with a letter of interest (please indicate date of arrival) to info at costabalenae.it addressed to Davide Ascheri as soon as possible. For any further enquiry and detail, ie to receive the info package, please send an email to info at costabalenae.it Davide Ascheri Biologist - Costa Balenae Whale and Nature Watching info at costabalenae.it -------------- next part -------------- An HTML attachment was scrubbed... URL: From panti4 at unisi.it Fri Aug 31 08:03:44 2018 From: panti4 at unisi.it (Cristina Panti) Date: Fri, 31 Aug 2018 17:03:44 +0200 Subject: [MARMAM] Book on Marine Mammal Ecotoxicology (Elsevier/Academic Press) Message-ID: <005a01d4413b$cfe6eac0$6fb4c040$@unisi.it> Dear MARMAM members, As co-editors and on behalf of all the authors, I would like to share with you the publication of the book: "Marine Mammal Ecotoxicology: Impacts of multiple stressors on population health" by Elsevier/Academic Press (https://www.sciencedirect.com/book/9780128121443/marine-mammal-ecotoxicolog y ), ISBN: 978-0-12-812144-3, https://doi.org/10.1016/C2016-0-03201-1 . Description: Marine Mammal Ecotoxicology: Impacts of Multiple Stressors on Population Healthprovides tactics on how to develop a comprehensive methodology for the study of existing threats to marine mammals. By presenting a conservation-biology approach and new and emerging technologies, this work helps provide crucial knowledge on the status of marine mammal populations that not only helps readers understand the ecosystem's health, but also instigate mitigation measures. This volume provides information that helps investigators unravel the relationships between exposure to environmental stressors (e.g., climate change, pollutants, marine litter, pathogens and biotoxins) and a range of endpoints in marine mammal species. The application of robust examination procedures and biochemical, immunological, and molecular techniques, combined with pathological examination and feeding ecology, has led to the development of health assessment methods at the individual and population levels in wild marine mammals. Key Features: * Provides a comprehensive, worldwide update and state of knowledge on current research and topics on marine mammal ecotoxicology * Includes coverage of both new and emerging technologies * Features a multidisciplinary approach that gives readers a broad, updated overview of the threats facing marine mammals and related conservation measures Thank you for your interest on the book! Best regards, Cristina ><> ><> ><> ><> ><> ><> ><> ><> ><> ><> ><> ><> Cristina Panti, PhD Department of Environmental, Earth and Physical Sciences University of Siena Via P.A. Mattioli, 4 53100, Siena Italy Ph. +39 0577 232883 Fax. +39 0577 232930 -------------- next part -------------- An HTML attachment was scrubbed... URL: From phillip.clapham at noaa.gov Fri Aug 31 09:55:36 2018 From: phillip.clapham at noaa.gov (Phillip Clapham - NOAA Federal) Date: Fri, 31 Aug 2018 09:55:36 -0700 Subject: [MARMAM] Predatory publishing Message-ID: Further to my recent post about predatory publishing, the following was published today in *Bioscience*: Clapham, P. 2018. Are Creative Commons licenses overly permissive? The case of a predatory publisher. *Bioscience* doi: 10.1093/biosci/biy098. This is available for download at: https://doi.org/10.1093/biosci/biy098 -- Phillip J. Clapham, Ph.D. Leader, Cetacean Assessment and Ecology Program Marine Mammal Laboratory Alaska Fisheries Science Center 7600 Sand Point Way NE Seattle, WA 98115, USA tel 206 526 4037 email phillip.clapham at noaa.gov -------------- next part -------------- An HTML attachment was scrubbed... URL: